Candidatus Improbicoccus pseudotrichonymphae: CfP315_0086
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Entry
CfP315_0086 CDS
T09760
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ips
Candidatus Improbicoccus pseudotrichonymphae
Brite
KEGG Orthology (KO) [BR:
ips00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ips03016
]
CfP315_0086
Enzymes [BR:
ips01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CfP315_0086
Transfer RNA biogenesis [BR:
ips03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CfP315_0086
Prokaryotic type
CfP315_0086
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BED91585
UniProt:
A0AA48IGM5
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All DBs
Position
100708..101487
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AA seq
259 aa
AA seq
DB search
MRNQEILGNVLMVISFDGGNYHGWQIQKNAVSIQEIFQECLAKVIGKAIDIKGCSRTDVG
VHANVYCISADVPIKISEDNLIFALNNLLPNDIVVIKCLKTGENFHARYSCLAKEYVYKL
YFSRIKDPFLNRKVFYYPRCLNIKLMKNAAKFFVGKHNFSSFYNKNNQKMDLDFTKNIFY
FDIEKHEKIIEFRIKADGFLYNMIRIMIGTLIKISKDNLTPETVKFIMNKKDRKYAGPTV
PACGLYINKIFYCSLDFNN
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
ttgcgaaatcaagaaattttagggaacgtgcttatggtaataagtttcgatggcggcaac
tatcatggttggcaaatacagaaaaatgccgtttcgattcaagagatttttcaagagtgt
ttagcaaaggttattggtaaggctatagacataaaagggtgttcccgcaccgatgttgga
gttcatgcaaacgtgtattgtatcagtgctgacgttcccataaaaatttcagaagataat
ttaatttttgcattaaataatctcttgccaaatgacatagtagtgattaaatgtttaaaa
acaggcgaaaatttccacgcgagatactcttgtttagcaaaagaatacgtttacaaattg
tatttcagcagaattaaagatccttttttgaatagaaaagttttttattatcctcgctgt
ttgaatataaaactaatgaaaaatgccgctaaatttttcgtcggaaaacataatttttct
tcgttttataataaaaataatcaaaaaatggatttagattttactaaaaatatattttat
tttgatatagaaaagcacgaaaaaataatagaattcagaataaaagcggacggtttttta
tacaacatgattcgaataatgataggcaccctcataaaaatttccaaagataatttgacg
cccgaaactgtaaaatttataatgaataaaaaagacagaaaatacgccgggccaaccgtg
cctgcctgtgggttgtatataaacaaaatattttattgttcgttagattttaataattaa
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