Candidatus Improbicoccus pseudotrichonymphae: CfP315_0178
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Entry
CfP315_0178 CDS
T09760
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ips
Candidatus Improbicoccus pseudotrichonymphae
Brite
KEGG Orthology (KO) [BR:
ips00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CfP315_0178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ips03021
]
CfP315_0178
Transcription machinery [BR:
ips03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CfP315_0178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
EhaM
Motif
Other DBs
NCBI-ProteinID:
BED91667
UniProt:
A0AA48I0S6
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All DBs
Position
178386..179453
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AA seq
355 aa
AA seq
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MAEDKEDKDEAEEEKGKIDENLNEDPGFLSPNSDEEYKSSSEDSIESNVNDIDQKLKTYN
EFFFSRNNSSAASGDNNTNVEDSIRLYLREIGKVPLLTVEEEINLAMRIAQGDKRAKEEL
IEANLRLVVSISKRYLGKGMHFLDIIQEGSVGLMKAVEKFDYTKGFKFSTYATWWIRQSI
TRALADQSRTIRIPVHMIETLNKIKNVSNVMLHSNGQEATLDELAREINVSVDKIRDAIK
SSLDPLSLEAPISNDNSDRFLRDSIRDDTIESPQDNATRKILRNELLKQIRKLTPRESRI
LCLRFGFYDGKTQTLEEVGKEFKVTRERIRQIEAKALKKLRYMNKVSGLSGYLQV
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagataaagaagataaagacgaggcggaagaggaaaaaggcaaaattgatgaa
aatttaaacgaggatcctggatttttgagtccaaattcggatgaggaatataagtcatct
agcgaagatagcatagaaagtaacgtaaatgatatagatcagaagttaaaaacatataat
gaattttttttttcaagaaacaattcatccgctgcttccggcgataataatacgaatgtc
gaagattccattaggttatacttacgagaaataggtaaagttcctctattgaccgtcgaa
gaagaaattaatttagcaatgaggatagctcagggagataaaagagcaaaagaagagctt
attgaagcaaatttaaggcttgtggttagtatttcgaagagatatttaggtaaaggcatg
cattttcttgatataattcaagaaggtagtgtcggactaatgaaagccgttgaaaagttt
gattataccaagggatttaaattttcaacatatgccacctggtggattcgtcagtctatt
acaagggctttggcggatcagtcgagaacaataagaatacctgttcacatgatcgaaact
ctcaataaaattaaaaatgtctctaatgttatgcttcacagtaatgggcaagaggcaaca
ttggatgagttggcaagggagataaatgtatcggttgataaaattagagatgcaattaaa
tcgtctttggatccattgtctctagaggcacctataagtaatgataacagcgacagattt
ttaagagatagtatccgtgacgatacgattgaatcacctcaagataatgcgaccagaaag
attttaagaaatgaattgttgaagcaaataagaaaattaactcctagagaaagccggatt
ttgtgtttaagatttggtttttatgacggtaaaacccaaactctcgaagaagttggaaaa
gaatttaaagttacaagagaaagaattcgccagatagaagccaaagctttgaaaaagttg
agatatatgaataaggtgagtggtttgagtggctatttgcaagtttga
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