Candidatus Improbicoccus pseudotrichonymphae: CfP315_0245
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Entry
CfP315_0245 CDS
T09760
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ips
Candidatus Improbicoccus pseudotrichonymphae
Brite
KEGG Orthology (KO) [BR:
ips00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ips03016
]
CfP315_0245
Enzymes [BR:
ips01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CfP315_0245
Transfer RNA biogenesis [BR:
ips03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
CfP315_0245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
EF-hand_PLCG1
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
BED91728
UniProt:
A0AA48HUS0
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Position
complement(250686..252005)
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AA seq
439 aa
AA seq
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MYQKLKKWLNKFAFGYKIGFFTKVFGCQQNEFDIERVKEFLVNVGFISTDKIEEAGLIVI
NTCAVRHSAEDKIFGYMGELKKIKNSNPNVFIIILGCMTQQKHIKERILKSYPHVDLILG
TSFDEFSKIFKDFNLSYLPKNECKNKSRALISIISGCNNFCSYCIVPFVRGRERSKDINE
ILEKVNTLIKSNCKDITLLGQNVNSYGNDFIDSNINFSVLLNEINKIKGDYRLRFMTSHP
KDFSDELIHAIKNNKYMCNHIHLPFQSGSNKILNLMNRKYTREKYLEIINKIKFYLPNFF
ITGDVIVGFPGENEDDFGQTLSLIKEVNFISVFSFIYSPRKHTFAYNLKDTTTRECKIKR
MQEFIEIQRKITERKLNELLDKEFRVLIENHEDNFLTGRLDNNLTVKIKNTKETNSKEFY
FVRINKIEKNSLFGEFVNS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagaaattaaaaaaatggttaaataaatttgcttttggttataaaattggcttc
tttacgaaagttttcggatgccaacaaaacgaatttgatattgaaagagtaaaagaattt
ctagttaatgtcggatttatttcaactgacaaaatagaagaagccggtttaatagtaata
aatacttgtgccgtcagacattccgccgaagataaaatttttggttatatgggcgaatta
aaaaaaatcaaaaacagtaaccctaatgtttttataataattctcgggtgcatgactcag
cagaaacatataaaagagaggattttaaaatcttatcctcatgttgatttaattttaggc
acatcttttgatgaattttcaaaaatttttaaagattttaatttatcttatttacccaaa
aatgaatgtaaaaataaatctagggctttgatatctataatttcaggttgcaacaatttt
tgttcctattgcatagttccttttgtcagaggaagagaaagaagtaaagatataaacgaa
atattggaaaaagttaatactttaattaaatcaaattgtaaagatatcactttgttaggt
caaaatgttaattcctacggcaatgattttatagattcgaatattaatttttctgtttta
ttgaacgaaataaataaaataaagggcgattatcgcctgagatttatgacatctcatcct
aaggatttttccgatgaacttatacatgcgataaaaaataataaatatatgtgtaatcac
attcatttaccatttcaatcaggaagtaataaaattttaaatttgatgaacagaaaatat
acgagagaaaaatacttggaaataatcaacaagataaaattttatctgccaaattttttt
ataacaggggatgttatagtgggatttcctggtgaaaacgaagatgactttgggcaaacc
ctttctttaatcaaagaagttaattttatttctgtttttagttttatatattcccccaga
aaacatacgtttgcgtataatcttaaagatacaaccacaagagaatgcaaaatcaaaagg
atgcaagagtttatcgaaatacaaagaaaaataacagagagaaagctaaacgaactttta
gataaagaattcagagttttaatagaaaatcatgaagataattttttaacaggaagactt
gataacaatttaacagtaaaaataaaaaacacaaaagagacgaactctaaggaattttat
tttgttagaattaacaaaatagaaaaaaattctttatttggcgagtttgtaaatagttaa
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