Candidatus Improbicoccus pseudotrichonymphae: CfP315_0255
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Entry
CfP315_0255 CDS
T09760
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ips
Candidatus Improbicoccus pseudotrichonymphae
Pathway
ips03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ips00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CfP315_0255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ips03019
]
CfP315_0255
03110 Chaperones and folding catalysts [BR:
ips03110
]
CfP315_0255
03029 Mitochondrial biogenesis [BR:
ips03029
]
CfP315_0255
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ips04147
]
CfP315_0255
Enzymes [BR:
ips01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CfP315_0255
Messenger RNA biogenesis [BR:
ips03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CfP315_0255
Chaperones and folding catalysts [BR:
ips03110
]
Heat shock proteins
HSP60 / Chaperonin
CfP315_0255
Mitochondrial biogenesis [BR:
ips03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CfP315_0255
Exosome [BR:
ips04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CfP315_0255
Exosomal proteins of other body fluids (saliva and urine)
CfP315_0255
Exosomal proteins of breast cancer cells
CfP315_0255
Exosomal proteins of colorectal cancer cells
CfP315_0255
Exosomal proteins of bladder cancer cells
CfP315_0255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4928
DUF8117
Motif
Other DBs
NCBI-ProteinID:
BED91737
UniProt:
A0AA48KYD0
LinkDB
All DBs
Position
complement(259366..261000)
Genome browser
AA seq
544 aa
AA seq
DB search
MAKKIIYGENARKALLEGINKLANTVKATLGPKGRNAVLDKKYGSPLITNDGVTIAKEIE
LDDAFENMGAQLVKEVAIKTNDVAGDGTTTATLLAQTLIREGMKNVAAGANPMILKKGIK
IAVDAAVEALKSNSQKVRGSEDIARVAAISAGDETIGNLISEAMEKVSADGVITVEESKT
AETYSEVVEGMMFDRGYVTPYMVTNNEKMEAIIDDAYLLITDKKISSIREILTLLEQIVK
IGKKLVIIAEDIEGDALATLIVNNLHGTFKCVAVKAPGFGDRRKEMLLDIAILTGGEVIS
EELGLELKDAKLEQLGKAHQVKVEKERTIIVDGGGDKSKIKDRIAQIRAQIADSTSDFDK
EKLQERLAKLTGGVAVIKVGAATEVEMKEKKLRIEDALAATKAAVEEGIVAGGGIALVNT
IKNVKSVVDKTQGDEKTGGTIVLQSLEAPLRQIAENAGLEGSVIVENVKKNGQPGYGFNA
LTGEYGNMIPSGIVDPTKVTRCALQNAASVASMVLTTESLVTEIKEPQNSMSSPQPDPGM
GGMY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaagattatttatggcgaaaatgccagaaaggctcttttggaaggtataaat
aaacttgcaaatacagttaaggctactcttggcccgaaagggagaaacgctgttttggat
aagaagtatggttctcccttaatcactaatgatggggtgacgatagctaaggaaatcgaa
cttgatgatgcgtttgagaatatgggtgctcagcttgtaaaagaagttgctatcaaaacg
aatgatgttgctggtgatggtactacaacggcaacgttgcttgctcagactttaattcgc
gaggggatgaagaatgttgctgcaggcgcaaatcccatgattttgaaaaaaggtataaaa
atcgcagtagatgcagcggtagaggcacttaagtctaactcgcaaaaagtaagaggttct
gaggatattgcgagagtcgctgctatttcggccggtgatgagactataggcaatttgatt
tctgaagctatggagaaagttagtgcagatggagttataacagttgaagaatccaaaaca
gcggaaacttattcggaagttgtcgaaggaatgatgtttgaccgtggttatgttacgccg
tatatggtcacaaacaatgaaaagatggaagccataatagatgacgcttatctattgata
acggacaaaaaaatttcaagcataagagaaattttgacattactcgaacaaatagtaaaa
ataggtaagaaacttgtcatcatagcggaagacatcgaaggcgacgctttggcaacctta
atagttaataatttgcatggcacgttcaaatgtgtagctgttaaagctcccggatttgga
gacagaaggaaagaaatgttacttgacattgccatccttacgggtggagaggtaatttca
gaagaacttgggctcgaacttaaagatgcaaagttagaacagttgggtaaggctcatcaa
gttaaagtcgaaaaagaaagaacaattatcgttgacgggggtggggataagtcaaaaatt
aaagacaggattgctcaaattcgtgctcaaatagccgattctacttccgattttgataaa
gaaaaacttcaagaaagacttgcgaaacttaccggaggggtagcggttataaaagtaggt
gctgcaactgaagtcgaaatgaaagagaagaaacttagaatagaagatgcacttgcggcg
acaaaagcggctgtcgaagaaggaattgtagccggtggaggaattgctcttgtcaacacg
attaaaaacgtaaaatcagtagttgacaaaactcaaggcgacgaaaaaacaggtggaaca
attgttttacagtctttagaagctccgttgcgacaaatagctgaaaatgccggattagag
ggatcggttattgttgaaaatgtaaagaaaaacggtcaacccggttatggattcaatgct
ttgaccggagagtacggcaacatgataccaagcggaattgttgatccaaccaaggttaca
cgctgtgctttgcagaacgctgcttcggtcgcgagtatggtacttacaaccgaatctttg
gttaccgaaataaaagaacctcaaaattcaatgtcatcacctcaaccagatcccggaatg
ggcggaatgtattga
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