Candidatus Improbicoccus pseudotrichonymphae: CfP315_0322
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Entry
CfP315_0322 CDS
T09760
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ips
Candidatus Improbicoccus pseudotrichonymphae
Brite
KEGG Orthology (KO) [BR:
ips00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ips03400
]
CfP315_0322
Enzymes [BR:
ips01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CfP315_0322
DNA repair and recombination proteins [BR:
ips03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CfP315_0322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
BED91792
UniProt:
A0AA48I2M0
LinkDB
All DBs
Position
complement(334634..337828)
Genome browser
AA seq
1064 aa
AA seq
DB search
MVNYFIVERRLKILNFILSPSGYGKTLKIKKAILRETKIKNNVILLVPEKKSFEIEYDLI
NFLGEENFKFVKVLTFKRFLKFVYRYLGNINVKFMQKSIRNILMRQSIDETKSGFEFFNK
NSNSFEIINIFKDIIREIKNDNLTAPFLKKEYELMENKNLKKKLNDVLLVFEKYEKIIKE
KNDSINELFFLHKLVKNNNFFKNFKIFIDEFFYFTPAQLNIIETMILQTDVTIAFKYDSL
NREIKNGSVFNWYFLTENTTNKILDSCKKINLSDINILFLDKKNAFSKSDELRILEQNIF
RIDKKTIKNENITENILIYEASNKYDECDFVARSIKKMIMQDNYRYRDFLIVILEDTLSY
EILIKKTLNNYDIPYFLDKNEPIYSKNLMILIFSSLDFIISNFETENLFKYLKTSFSGFL
YEDVCIIENYCRIWKINGKSWFNDFRFLKDKKSEKEFENLNYINNLRKKIISPFVNFKKK
LLKNENIFKIFYEFLMEINLPETIKKKCETLTENNRIIAAEEQLKIWNILIESLEEISHL
FLNKKIDLKYFRECIEISIKSKKISFIPKYEDEVIIDFYGEELSGRCNIIFTLGDFKNKF
LNENKILNLDEIKKAADKNLKSENTIDKMLSKELFLMYSLLTSATEKIFICSKKAKNNLN
TNNEIIKEIKKVFTNVEVKSYVNYSLEDYCWTEKNSFLIYCKYINNFASLNHQEKNIIFS
LKKHFQNNEKYKRKLNLFDLKKSEQKIEKIEIFNKNEISVSEIEKFYLCKFAYFFKYMLK
IRNDFNYFKRYNLFNNFLIKKNFKNNNIDKNKILEDIYELFKTHLNIDEKKQNARYKYLI
SRQTNLIVSLIENFKKYFKKNEIFVLNRIKTEEFQEINLEKNLNIKIINSKNDNLNIIEH
KKNKYLGLINFKFRQEKLNLNKIFEIENFKALMYLKAIKENKIFDENHKSLSGIFNFYFD
KNATKSYDFHHRDDSEEMTNIKKDALILRNSDCVEETKKTKLINTNEFKLVDKYLRDSIF
EMVSEIKETNFFSGRSPKCKDKKMCLWCDYKDLCKQKINLTTLL
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
ttggtcaattattttatcgttgaaaggagattaaaaattttaaattttattttaagcccc
tccggatatggcaaaacgttaaaaattaaaaaagcgatattaagagaaacaaaaatcaaa
aataatgtaattcttttagtccctgagaaaaaatcatttgaaattgaatatgacctaata
aactttctgggagaagaaaactttaaatttgttaaagttttgacctttaaaagatttcta
aaatttgtgtaccgttatttgggtaatatcaatgtcaaatttatgcaaaaaagcatcaga
aatattctgatgagacaatccatagacgaaacgaaaagtggttttgaattttttaacaaa
aattcaaattctttcgagataataaatatttttaaagatataataagggaaattaaaaac
gataatctaaccgcgccctttcttaaaaaagaatatgaattgatggaaaacaaaaatctg
aagaaaaaattaaacgacgttttactggtatttgaaaaatacgaaaaaataattaaagaa
aaaaacgacagcatcaatgaattattttttctacataaattagttaaaaataataatttt
ttcaaaaattttaaaatatttatagatgaatttttttattttactcctgctcaattgaat
attatagaaacaatgattctgcaaaccgatgtgactattgcctttaaatatgatagccta
aatcgtgaaatcaaaaatggcagtgtatttaattggtattttttaaccgaaaacacaacg
aacaagatattagattcatgtaagaaaataaatctttcagacataaacattttatttctg
gataaaaaaaatgcattttcaaaatcagatgagctcagaattctggagcaaaatatcttc
agaatcgacaaaaaaacaataaaaaacgaaaatattaccgaaaatattctgatttacgaa
gcttctaataaatacgacgaatgcgatttcgttgctagaagtattaaaaaaatgataatg
caagataattatcgttacagagattttcttattgtgattttagaagatactttgagctat
gaaatcttaataaaaaaaacactaaataattacgatattccatattttttggataagaac
gagccgatatatagtaaaaatttaatgattttgattttttcttctttagatttcatcatt
tcaaattttgaaacagaaaatttgtttaaatatctaaaaacaagtttttcgggatttcta
tacgaagatgtatgcatcattgaaaattactgccgaatttggaagataaatggcaaaagt
tggtttaatgactttcgttttctaaaagataagaaatctgaaaaagaatttgagaatcta
aattatataaataatttgcgcaagaaaataatatctcctttcgtgaatttcaaaaaaaaa
ttattaaaaaacgagaatatatttaagattttctatgaatttctgatggaaataaatcta
ccggaaaccattaaaaaaaaatgcgaaacacttactgaaaacaataggataattgccgcc
gaagagcaattaaaaatctggaatattttaatagaaagcttggaggaaataagccatctg
ttcctaaacaaaaagatagatttaaaatatttcagagaatgcatagagatatcaattaaa
tcaaaaaaaatttcttttataccaaaatatgaagatgaggtcatcattgatttctatgga
gaagaactttctggcagatgcaatattatttttacattgggtgattttaaaaataaattt
ttaaacgaaaataaaattttgaatttagatgaaattaaaaaagcagcagataaaaattta
aaatcagaaaatacaatagacaaaatgttgagcaaagaattgtttcttatgtattcttta
ttgacaagtgctactgaaaaaatttttatatgctccaaaaaagccaaaaataatttaaat
acaaataacgaaatcatcaaagaaattaaaaaagtatttacaaatgtcgaagttaaatcc
tacgtaaattacagtttggaagactattgttggaccgaaaaaaattcttttttaatttac
tgtaaatatattaacaattttgccagtttaaaccatcaagaaaaaaatataattttttct
cttaaaaagcattttcaaaacaacgaaaaatataaacgaaaattaaatctattcgatcta
aaaaaaagcgaacaaaaaatagaaaaaattgaaatttttaacaagaacgaaatttctgtt
tcggaaattgagaaattttatctatgcaaatttgcttacttttttaagtacatgctgaaa
attagaaatgatttcaattatttcaaaagatataatttatttaataatttcttaattaaa
aagaatttcaaaaataacaacatagataaaaacaaaattcttgaagatatttatgaactt
tttaaaacccatttaaacatagatgaaaaaaaacaaaacgctagatataaatatctaata
tcaagacaaacgaacttgatcgtttcacttatagaaaactttaaaaaatacttcaaaaaa
aacgaaatttttgttctgaatagaataaaaacagaagaatttcaagaaatcaatttggaa
aagaatttaaatataaaaataataaacagcaagaatgataatctaaacataatcgaacac
aagaaaaacaaatatcttgggcttatcaacttcaaatttagacaagaaaaactcaattta
aataaaatttttgagatcgaaaattttaaagcattgatgtacttaaaagcaataaaagaa
aacaaaattttcgacgaaaaccacaaatccctttcgggtatttttaatttttattttgat
aaaaatgcaacaaaatcctatgattttcatcatcgagatgattcagaagaaatgacaaac
attaaaaaagatgcgttaattttaagaaatagtgattgtgtcgaagaaacaaaaaaaaca
aaattgataaacacaaacgaattcaaattagtagacaaatacctaagagattctatcttt
gagatggtgtctgaaatcaaagaaacaaacttcttttctggtcgctctcccaaatgcaaa
gacaaaaaaatgtgcctatggtgcgactacaaagatctctgtaaacaaaagattaatttg
actacgctgctataa
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