Candidatus Improbicoccus pseudotrichonymphae: CfP315_0389
Help
Entry
CfP315_0389 CDS
T09760
Name
(GenBank) methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
ips
Candidatus Improbicoccus pseudotrichonymphae
Pathway
ips00450
Selenocompound metabolism
ips00970
Aminoacyl-tRNA biosynthesis
ips01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ips00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CfP315_0389
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CfP315_0389
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ips01007
]
CfP315_0389
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ips03016
]
CfP315_0389
Enzymes [BR:
ips01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
CfP315_0389
Amino acid related enzymes [BR:
ips01007
]
Aminoacyl-tRNA synthetase
Class I (U)
CfP315_0389
Transfer RNA biogenesis [BR:
ips03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CfP315_0389
Prokaryotic type
Other AARSs
CfP315_0389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA_bind
Anticodon_1
tRNA-synt_1e
Anticodon_3
YhfH
DUF7129
Motif
Other DBs
NCBI-ProteinID:
BED91854
UniProt:
A0AA48I4B2
LinkDB
All DBs
Position
complement(404683..406605)
Genome browser
AA seq
640 aa
AA seq
DB search
MKNFFITTPIYYPSGQAHLGHCYSTIASDVMARYKKMKGFEVFFSTGTDEHGQKIEANAK
SKGLKPIEYIEPIVDNFKKLWKVLGISYDIFIRTTDENHKLTVQKVFESLYKKNKIYKGR
YEGWYCLPCESFFSESNLKDGKCPDCGREVKKQSEEAYFFRLSDYGGKLLEFYEENPDFV
QPETRKNEMINFINSGLEDLCVSRTNFEWGIQVPFDSKHVIYVWFDALINYISVLGYGSN
NGFLFEKFWPADFHIVGKEITRFHTVVWPAVLMALDLPISKCVYGHGWLLFNNDKMSKSK
GNIIDPFVLCDKYGADPIRYFLMREIPFGLDGSFDETILVNRLNSDLANDLGNLISRMTS
FAHGFFQIVEDFESSYVTLSELGANVKIDLELIEKVDKLIEIYEENMDKLKFALVLSKIW
EVISFCNKYVDLNSPWKFEKDKKGALEVSKVLYNVFETLRIIAILLSPFIPKMSEEIMEI
IGSGKNDFLNDLKWGVLDKKSKIKKCNSFFRRIIPTQDNNDDKNLNLKEESCKNSEIKIE
DFSKLDLRVAKVLECQKIKKTDNLFKCVLFDGKKMRTIVSGTAKYYIPEDLVNRNVIIIT
NLSPITLCGIRSEGMILTSEHKDTIAIVFVDNLKPGSKIS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatttttttattaccacacctatttattatccttccgggcaagctcatttgggt
cattgttatagcaccattgcatccgatgttatggcaagatataaaaaaatgaagggtttt
gaagttttttttagcaccggcacggatgagcatgggcaaaaaatcgaagcaaacgcaaaa
tcaaaaggattaaaaccaattgaatatatcgaaccaatagttgataatttcaaaaagtta
tggaaagttttgggtatttcttatgatatttttattagaactaccgacgaaaatcataag
ttaaccgttcaaaaagtttttgaatctctatacaaaaaaaataaaatatataaaggcaga
tacgaaggatggtattgtttgccttgtgaaagttttttttcagagtctaatttgaaagac
ggaaagtgcccagattgtggccgagaagttaaaaagcaatcagaggaggcttattttttt
agactttctgattatggaggaaaacttttagagttttatgaagaaaatccggattttgtc
caaccggaaacaagaaaaaatgaaatgataaattttataaactccggtttggaggatttg
tgtgtaagcagaacaaatttcgaatgggggatacaagtcccattcgacagtaaacacgtc
atatatgtttggtttgatgctttgattaattatatttctgttttgggttatgggtcaaac
aacggatttcttttcgaaaaattttggcctgcggattttcatattgtcggaaaagaaatt
acaagatttcataccgtcgtttggccggctgttttgatggctcttgatttgccaataagt
aaatgtgtgtacggccatgggtggctattgttcaataatgataaaatgtccaaatcaaag
ggtaatataattgatccttttgtgttatgcgataaatatggcgcagatcctattagatat
tttttaatgagagaaataccgtttggtttggatggttcctttgacgaaacaattctcgtt
aataggttaaattctgatttggcaaatgatttgggtaatcttatatcaagaatgacatct
tttgctcatggtttttttcaaatagtcgaagatttcgaatctagttatgttactctgtct
gaactcggcgcaaatgttaaaatagacttagagttaatagaaaaagtagataaattaata
gaaatttatgaagaaaacatggacaaactaaagttcgctcttgttttgagtaaaatttgg
gaggtcatatctttttgtaataaatacgtagatttaaattctccatggaaatttgaaaaa
gataaaaaaggagcattagaagtctcgaaagttctgtacaatgtttttgaaaccttaaga
ataattgccattttgctgtctccgtttattccaaaaatgtcagaagaaattatggaaata
ataggctccggcaaaaatgattttttgaacgatctgaagtggggagttttggacaaaaaa
tcaaaaattaaaaagtgcaattcgttttttaggagaataataccaactcaagacaataac
gatgacaaaaatctaaatttaaaagaagaatcatgcaaaaacagcgaaataaaaatagaa
gatttttctaaattggatctgcgggtagcgaaagttctcgagtgccaaaagattaaaaaa
accgataatttatttaagtgtgttctgttcgatggcaaaaaaatgagaacaattgtttcc
ggtaccgcaaaatattatatacccgaagatttggttaacagaaacgtaataatcatcaca
aatctttcgccaatcactttatgtggaataagaagcgaaggaatgatacttacaagcgaa
cacaaggataccatagcaatagtttttgtcgacaatctgaaacccggcagcaagatttcg
tga
DBGET
integrated database retrieval system
