Candidatus Improbicoccus pseudotrichonymphae: CfP315_0631
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Entry
CfP315_0631 CDS
T09760
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ips
Candidatus Improbicoccus pseudotrichonymphae
Brite
KEGG Orthology (KO) [BR:
ips00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ips03032
]
CfP315_0631
03400 DNA repair and recombination proteins [BR:
ips03400
]
CfP315_0631
Enzymes [BR:
ips01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CfP315_0631
DNA replication proteins [BR:
ips03032
]
Prokaryotic type
DNA Topoisomerases
CfP315_0631
DNA repair and recombination proteins [BR:
ips03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CfP315_0631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF7526
Motif
Other DBs
NCBI-ProteinID:
BED92056
UniProt:
A0AA48HVA2
LinkDB
All DBs
Position
complement(663344..665761)
Genome browser
AA seq
805 aa
AA seq
DB search
MDKNEQIIEVNIDEEMKRSFLDYSMSVIVSRALPDARDGLKPVHRRILYTLFENNLTSDK
PYRKCADTVGSVLGRYHPHGDASVYDALVRMAQSFSMRYALIDGHGNFGSVDGDPPAAYR
YTEARMSKISSEILKNIDKETVDFASNYDDRLEEPTVLPSRFPNLLANGSSGIAVGMATN
IPPHNLGEIIDATCHLIDNPDADIDEIMKFIKGPDFPTGGIIIGNEEIKKAYKTGRGKIT
VKAKVEIEEGENSKNRIIVTELPYQVNKARLVESIANLIKDKKIESITRIEDHSDREGMR
IEINVKSSSSMKLVLNQLYSYSQLQVTFGVIMLAIVNGEPKILNIKESLQIYINFQVEII
TRRTNFDLKKSLARVHILNGLKIAIDNIDKVISILRSSSTVAEGKAGLTEEFDLSKEQTE
AIVQMALGKLTNLEINKLEDEIKLLNEKISYFNSILSDRNKLLSILKDEVLEIKKHFSDK
RRTEIVYQEDKTNIEDLIPHCEKVVIFTNMGYIKTQNIDLYHAQKRGGRGVSGLTRREDD
SANEIITADSHDFILFFSNLGKVYKLKCYEIPEGSKVSKGLNIINLLSLVKDEKITSFLK
VSKFESNSYLVMVTKFGYIKKTSLDLFEAVRKNGIAAINLESGDELVWTKITNGSRKLLI
TTRKGKSIRFNESELRPLGRSTRGVRAIRLAKGDYIINMITAENSDMILTVSETGYGRIS
KGSDFRLQGRGGSGIINYHSKNYGNVAATVNVKLNDDLIIIASNGIIIRIKANSVKQCSR
PSKGVKIMKLNKKDKIVSVINTENI
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaacgagcaaataatagaagtaaacatagatgaagaaatgaagagatccttc
ttggattactctatgtctgtaatagtttcaagggctctcccggacgccagagatggttta
aagcctgttcacagacgtatactttatacactttttgaaaataatttgacatccgataaa
ccgtatagaaaatgtgctgatacggttggctctgttttgggaagatatcatccccatggg
gatgcgtctgtttatgacgctctagttagaatggcccagagcttttcgatgagatatgca
ttaatagacggacacggaaattttggttccgtggacggcgatccgccagcagcttacaga
tataccgaagccagaatgagtaaaatttcttcggaaattttaaagaatatagataaagaa
actgtagattttgcttctaactatgatgacaggcttgaagagccaacggttttgccgtct
agatttccgaatttattagccaatggttcttccgggattgccgttggtatggcgacaaat
attcctccgcataatttgggcgaaataatagacgccacgtgtcatttgatagataatcca
gacgcagacattgatgaaataatgaaatttataaaaggcccggatttcccaaccggtgga
attattataggtaacgaagagataaaaaaagcatacaaaaccggacgtgggaaaataaca
gttaaagcaaaagtcgaaatcgaagagggcgagaattcaaaaaatagaataatagtaacc
gagcttccatatcaggtaaacaaagctaggttagttgaatcgatagctaatttaataaaa
gataaaaaaatagaatcaattacaagaatagaagaccattcagatcgcgaaggcatgcgt
atagaaattaatgtaaagtcttcgtcatctatgaaattggttttgaatcagttatacagt
tattctcagcttcaggttacttttggtgtcataatgcttgccattgtcaatggcgaaccc
aaaattcttaatataaaagaaagtcttcaaatttatattaattttcaagttgagattata
actcgtagaacaaatttcgatctaaaaaaatcactcgcgagagttcatattttaaatggt
cttaaaattgcgattgataatatagacaaagtcataagtattttgcgatcatcttccaca
gtggccgaaggaaaggccggtttgacggaagaatttgatctttccaaggaacaaaccgag
gctatagtacaaatggcgcttgggaaacttacaaatcttgaaataaacaaactagaggac
gaaataaagctattaaatgaaaaaataagttattttaacagtattttatcagatagaaat
aaattgctttcgattttaaaggatgaggtcctcgagataaaaaaacatttttccgacaaa
agaaggactgaaatagtttatcaagaagacaaaaccaatatagaagatttgatccctcac
tgtgaaaaagttgtaatttttacaaacatgggatacataaagacacaaaatatagattta
tatcatgcgcaaaaacgaggcggacgtggtgtttccggcctcactcgaagagaggacgat
tccgccaatgaaataattacagccgatagtcatgattttattttatttttttcaaattta
ggaaaggtttataaattaaaatgttatgaaataccggaaggctctaaagtttcgaaagga
ttaaatattattaatttattaagtttggttaaagatgaaaaaataacttcttttttaaaa
gtttcaaagttcgaatcaaattcatatctcgttatggttacaaagtttggttatataaaa
aaaacaagcctggatttgtttgaagcagtaagaaaaaacggcattgcggcgattaatctt
gaatccggtgatgaacttgtatggaccaaaatcacgaacggttccagaaagctgttaatc
acaacacgaaaaggtaaatccataagatttaacgaatctgagcttaggccgttgggacgt
agcaccaggggtgtaagggcaattagattggccaaaggcgattacatcataaatatgatt
acggccgaaaacagcgacatgattctgaccgtctcagaaacaggctacggcagaatttca
aaaggttctgattttagactccagggaagaggcggaagtggaataataaattatcattcg
aaaaattatggaaatgtagcagctactgtaaatgtaaagttaaatgatgatttaataatc
atagcatccaatggtattataataagaataaaggcgaattcagtaaaacaatgctcgcgg
ccgtccaaaggtgtcaaaatcatgaaattaaacaagaaagataaaatagtgtctgttatt
aataccgaaaatatttag
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