Candidatus Improbicoccus pseudotrichonymphae: CfP315_0700
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Entry
CfP315_0700 CDS
T09760
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ips
Candidatus Improbicoccus pseudotrichonymphae
Pathway
ips00550
Peptidoglycan biosynthesis
ips01100
Metabolic pathways
ips01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ips00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CfP315_0700
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CfP315_0700
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ips01011
]
CfP315_0700
Enzymes [BR:
ips01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CfP315_0700
Peptidoglycan biosynthesis and degradation proteins [BR:
ips01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CfP315_0700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
BED92114
UniProt:
A0AA48KZB0
LinkDB
All DBs
Position
complement(747455..749455)
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AA seq
666 aa
AA seq
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MIRDLVQAEDKKYEFILYNRRRLNTSFVLVLSVFFLFIARIFYWQVFKYDILYRRAIEAN
TCFLKTDAVRGEIYDRDGIGLAVNSLRYRVIIERLDVPEGKENELIAKLVNFTTKLGNNF
FSSLPIVLNDLNNFEFSKDKEEQVKYLKKILKLPDSATASHCIDKLSEKFKCENFNACDR
YHICSVKYNNFRLGISSKASPLTIFDNVNEKSVSILIENSYKIPGMKIGTSLKRYYTFPE
TFAHIIGYTGIISNQEYEKYRGKYSLDSTIGKTGAELAFEEILRGYHGQRAIQLSKDNSI
INSNQVYESKSGNSVILTLSSKLQNAASESLKRNIMSAKKNGAQDCNSGAAVVIDLRDKD
FGILAAVSYPNFNLQKYIENNEYNREITNDKLSPLINRAFCACYAPGSTIKPLIALAALE
ENLINREELIKCNGSFNYFKNYNLHCMGRHGNIDLGTALVKSCNVVFAELGRRLGANRIA
EYAKKFGLGIKTGVELPEKEGILSTPERNKKLGIPWYPSFDSQIGIGQADTSFTPVQLAL
CAGVIATGENRKLHVLKQVMDYPKNNVVYKYEPKILGSNLVSEENLNLVIGRMKEVTYCG
TASDFKNFPIETAGKTGTSQNKGSDHTSYMCFTPEIAIFVIVANGKYGAYSKSVARDILK
CHYNLK
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgataagggatttggttcaagcggaagataaaaaatatgaatttattttatacaatagg
agaaggttaaatacttcttttgttttggttttgtctgtattttttcttttcattgcgaga
attttttattggcaggttttcaagtacgatatcctatataggcgcgcaatagaagcaaat
acttgttttttaaagaccgatgccgtcagaggtgaaatatacgaccgagatggcattggt
ttggccgttaatagtttacgttatagagttattatcgaaagattagatgtaccggaagga
aaagaaaatgaactcatagcaaaattggtaaattttacaacaaaattaggtaataatttt
tttagttctttgcccatagttttaaacgatttaaacaattttgaattttccaaagacaaa
gaagaacaagtgaaatatttaaaaaaaatattaaaattgcctgattccgccacggcaagt
cattgcatcgacaaactttccgaaaaatttaaatgcgaaaattttaatgcatgcgacaga
tatcacatatgtagcgtaaaatacaacaattttagacttggaataagctctaaggcttct
ccgctaacgatattcgataatgttaatgaaaaatctgtcagtattctgatagaaaattcg
tataaaattccaggtatgaaaataggtacgtcattgaaaagatattatacctttccagaa
acatttgctcatatcataggatataccggtattatatctaaccaagaatatgaaaaatac
agagggaaatatagtctagattcgacaataggcaaaactggtgcggaattggctttcgaa
gaaatactcagaggttatcacggtcagcgtgctattcagctctccaaagataattcgata
ataaattctaatcaagtatatgagtctaaatccggaaatagtgtaatattaactttatct
tctaagttacaaaatgcagcaagtgaatctctgaaaagaaatataatgtctgctaaaaaa
aatggagcacaagattgtaattccggcgccgctgttgttatagatcttagagacaaagat
tttgggattttggcggctgtaagttatcccaattttaatttacaaaaatatatagaaaat
aacgaatataacagagaaattacaaatgacaagctaagtcctttgatcaatagagctttt
tgtgcatgttatgctcccggttctactattaaaccgctcatagctttagctgctttggag
gaaaatttaataaatcgcgaagaactaataaaatgtaacggaagttttaattattttaaa
aattataatttgcattgtatgggtagacacgggaatatagatctcggaacggcattagtt
aaatcttgtaatgttgttttcgccgaattaggaagacgcctgggagcgaatagaatagct
gaatacgcgaaaaaatttggtcttggaatcaaaacaggggttgaattgccagaaaaagaa
ggaattctttctactccggaaagaaacaaaaaattaggtataccgtggtatccttctttt
gattctcaaataggaataggccaagcggatacgtcatttacgccggttcaacttgcgttg
tgtgctggagtaatagctaccggcgaaaatcgtaaattacatgtactaaaacaagttatg
gactacccgaaaaacaatgttgtttataaatatgagccaaaaatattgggaagtaatttg
gtttcagaagaaaacttaaacttagttataggaaggatgaaagaagttacttattgcgga
actgcttctgattttaaaaattttccgatagaaaccgcagggaaaaccggaacgtctcaa
aataaaggttctgatcatacctcatatatgtgttttacgccggaaatagcaatttttgta
attgtagccaacggtaagtatggtgcgtattctaaaagtgtagcaagagatatacttaaa
tgccattataatttaaaataa
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