Candidatus Improbicoccus pseudotrichonymphae: CfP315_0874
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Entry
CfP315_0874 CDS
T09760
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
ips
Candidatus Improbicoccus pseudotrichonymphae
Pathway
ips03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ips00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CfP315_0874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ips03400
]
CfP315_0874
Enzymes [BR:
ips01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CfP315_0874
DNA repair and recombination proteins [BR:
ips03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CfP315_0874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
RecG_wedge
RecG_dom3_C
nSTAND3
Cas3-like_C_2
TIP49
ERCC3_RAD25_C
SLFN-g3_helicase
IstB_IS21
MGDG_synth
Motif
Other DBs
NCBI-ProteinID:
BED92262
UniProt:
A0AA48KYV6
LinkDB
All DBs
Position
complement(921581..923695)
Genome browser
AA seq
704 aa
AA seq
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MNFSLFYVDISELKGVGKKTSVLYKNLGINSIGKLLMYFPVSYENWENVSSIYEISNSKE
EKIIKAKISEEVTCIFSRKNKKIYKLKAISENQIITISFFSIKNPSAKMKRGEEFLLSGK
FCKDKNGFKVICPKIKNINSSEKIVPLYPQSSKLPSWKIARATKEAIKLLPEKVKETLPY
FLIDKFNLATYDFMIKKIHFPFNLDELNKAKRRFLFEELLIWKFAMFILKNKISLSNKNM
IPNDKNVHKETKRKIGNESVVIKDFSHEFLEKLPFELTKSQKKVIFECIEDMKNPKLQSM
KRLLQGDVGSGKTVIAMALSYNIIKNGFKAIVMVPSEILAFQHHKRFLEVFEKFHDDDQT
FKNIYLFTKSTSKKQKEILVKILSDNNPAIIIGTHALITDDLKIANLAFVVIDEQHKFGV
NQRLKLISKSFLPHILVMSATPIPRSLALVFYGDLDFSVLNELPSGRKEIKTFLMESGRR
SEAIEFLENKLEEGSQGFIVCPLINKSEELISLTDYREKYLTKDFVKKFKPEIIHGKLKK
NEKENIMNDFYEGKIKLLISTTIIEVGIDAPKASVIIIENPERFGMATLHQLRGRVGRNS
NESYCILISDSKWGSAYRRLKTIKSSNDGFYLANQDLEQRGPGEFFGERQHGEFNRNLIE
ALKDDSIVNDCDNAIREVITRSPNLDSDESKFIKSKILKLISSF
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttctctcttttatgtggatatatccgagcttaaaggcgtaggaaaaaaaact
tcagttttatataaaaatttaggaataaacagcataggaaaattgttaatgtattttcct
gtgtcgtatgagaattgggaaaatgtttccagcatttacgaaatatcaaattcaaaagaa
gaaaaaataataaaagcaaaaatttcggaagaagttacgtgcattttttccaggaaaaat
aaaaaaatatacaaactcaaagctatatctgagaatcagattataacgatatcgtttttt
agtattaaaaatccgtcggctaaaatgaaacgcggagaagagtttttattatcgggtaag
ttttgtaaagataaaaacggttttaaagttatttgcccaaaaattaaaaatattaattct
tctgaaaaaatagtgcctttatacccgcaaagttctaaattaccatcatggaaaatagcc
cgcgccaccaaagaggccattaaacttttacccgaaaaagtcaaggaaactttgccctat
tttttaatagacaaatttaatcttgctacatatgactttatgataaaaaaaatacacttt
ccttttaatttggacgaattaaacaaggcgaaaagacgttttttattcgaagaattgtta
atttggaagtttgcaatgtttattttaaaaaataaaatttccctgtcgaataaaaacatg
attccaaatgataaaaatgtacataaagaaacaaaaaggaaaatcggtaatgaatctgtg
gttataaaagatttttcgcatgaatttttagaaaaattaccttttgaacttactaaatct
caaaaaaaagtcatatttgaatgcatagaagacatgaaaaatcctaagttacaatccatg
aaaagacttcttcagggcgatgtgggttccggcaaaacagtgatagcaatggcattatct
tataacataataaaaaatggttttaaagcaattgtcatggtaccttcagagatactggct
tttcagcatcataaaagatttttggaggtatttgaaaagtttcatgatgatgaccagaca
tttaaaaacatatatctatttacaaaatcgacttctaaaaagcaaaaagaaatcctggtc
aaaattttgtctgataataatccggctatcattatcgggactcatgcgcttattactgat
gatttaaaaattgcaaatttagcatttgttgtcatagacgaacaacataaattcggagta
aatcaacgtttaaaacttatatccaaaagttttttacctcatattttggtgatgtcggca
acaccgattcctcgcagtttggctttggttttttatggcgatttagatttttctgttttg
aatgaattgccgtcgggaagaaaagaaatcaaaacatttttaatggaaagcggaagacgc
agcgaagcgattgaatttctcgaaaataaactcgaagaaggatcgcaaggatttatagtc
tgcccgctaattaataaaagtgaggaattaatttctttgacagattatagagaaaaatat
ttaacgaaagattttgttaaaaaatttaagcctgaaattatacatgggaaattaaaaaaa
aatgaaaaagaaaatatcatgaatgatttttatgaaggcaaaattaaactgttgatttct
acaacaataatagaggttggcatagatgctccgaaagcttctgttataattattgaaaat
cccgaaaggttcggaatggcaactcttcatcaattgagaggacgtgttggcagaaattca
aatgagtcctattgtatactgatttctgattcaaaatggggaagtgcttatagacgttta
aagacgataaaatcttcaaacgatggattttatttagcgaatcaggatttggagcaaagg
ggccccggggaattttttggcgaaaggcaacacggtgaatttaacagaaatttaatagaa
gctttaaaagacgactcaatagtcaacgattgtgacaacgctataagagaagtaatcacc
agatccccaaatttagattccgatgaatctaaatttataaaatcaaagattttgaagtta
attagtagtttttaa
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