Ictalurus punctatus (channel catfish): 100303710 Help Entry 100303710         CDS       T04658                                  Symbol nlrc5 Name (RefSeq) protein NLRC5   KO K22615   NLR family CARD domain containing 5 Organism ipu  Ictalurus punctatus (channel catfish) Brite KEGG Orthology (KO) [BR:ipu00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:ipu04054]     100303710 (nlrc5) Pattern recognition receptors [BR:ipu04054]  Cytoplasmic pattern recognition receptors   NOD-like receptors    100303710 (nlrc5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  NACHT LRR_6 NLRC4_HD2 nSTAND3 AAA_30 LRR_4 AAA_25 AAA_16 NPHP3_N TsaE NB-ARC ABC_tran AAA_7 AAA_22 PhoH Motif Other DBs NCBI-GeneID:  100303710 NCBI-ProteinID:  NP_001186995 Ensembl:  ENSIPUG00000019679 UniProt:  C6FG12 LinkDB All DBs Position 4:11991488..12022289 Genome browser AA seq 1726 aa AA seqDB search MKMEEMDLEEDVLDVVDQEASTIVDILCEQRDNVLQRIFALVDARTREQLQHLPNNRESI SGLVDYFRTSDQHTCRRFLDIIWSFCENIPLELDIRIVNLAGSTAGALVNNSHVPDTENS PQSRYGKRARLDQVQSYTNAVKSFLQKKFEKVTKDIKKEVCLNNTWLCWRTQKYARVRDR PAKSQEGEEVSLEHKESVEALLMKTGRVVMLSGQAGSGKTLLMHCLAHHWAQGSYPSIEL LFLLEFRQLNLISQPLSLKELLFRFFLPSDEDDEQSEAVLNYVLSNPEKICFIFDGYDEF GARFKDPKELECSVNPYQQLPLADLLSALCSAKILPGCTVLVTCRPRDVFDLFGSSDYFV AELLGFNQQRVKEYTQEYFQEKGCEIKERAVSLLMDSHHLLSMSHVPGLCHVCCVCLDHF LTSDMSQQPGTQLPTSLTQIYLHILSAFISRCHGCGSSDNHTPLLQRYRVQIAMLSKLAM DGLENSRIVFPANELTTELMNFGANAGILSRLDLTCGDGSRRLGCAFTHLTIQEFMAALH LMTNPDITESQLKKKLNLKSRWTAKTDPKTVFTDSLHLYMCGLAAEACTSNLVLLKGSEN ARAIVLKRQDAVLKTLQRFVVSGRQTGPKIIELCRCAHETQNIDLARAIGPRDRFELRNI RLNPVDIDALAFVISSANQMVCLDFGACYIEPECLNIIPNCKNLEELNFRSRKYDDKFAE ALSGILPKLQSLKQLHFISGGLTNIGAAKLFKASECCPQITRLNVSDNYLTDESVKKITE LFPKLAKLTSVILGKNNISINGIFILAGKMAAFPNIKEVYANAKKKEINVQFSANTTNSA STDDLNNTEESKQLILNDWNLKWTNVHNLCPMLRGCSSLTVLNLSHNALGNRGLKKLLEH LPTLDTIQEINVSDNGVDMDGVVLLSPLLCTLKDLTEVEASHNGKKMLVLTFSSSIIDAL KQVTSEGCDILHKKLSLTHSDIHPTDMNKLCKNLIKCPNPLNLDFSHGTLKDESTEKLLK FLPNMASLNLLNLSHIQMSTDSALLLVQLLSDCQRTTTVELRQLGETFIKFLQDKSEAAT CKFNQYRLSSANLAKLCEILEHCHHLTDLDLSSNFLKDEDVKTFVQFLPKLQISGSVSLN NNNLTEVGVLYLLSLMHTCERVAAVEVSLGKEEQQDIIGFVQKNCTGKTFRLSSCTVQSQ NVLFLLNKLATLNSVQTLELRNNSFSADTIKYLITEFCGDCNHRTIRIMEPWIKGEAAVG LVQCCLELNPNIKEIRVEKTCLKLSVESLVSATIPNEWENGNCSLSAVHCISFDDCEVEG QHLSSLQSALRNCPSLQELHFSQLTMGADGAEFLSSVLPSLKNLKILSLSSKGETEDEAV IFALQHAQKHLEQLSLAHHVIKDRGAAVLGNALQGFTRMRSLSLLKCLDWTATGGRDLVR GLVQCHSLEEIRLDSIELDEESIDCFAQGLQAMTSLKKISLNKTISKEGSGVLCLLASLH PLIELEEIELIGLRMGDRGVEELVKHIPKWTRLRKINLSENRVSDHAGEMLVKALSHCRA LQQIHLFRNNLGHSSAAVLGQVLPSLSELTELDLSENQMESKGCSSVCEALVSMKALKKL HLTSIGTSDLVNVASCLKHCTSIEDISLSWNNCENDVVLKLAEVLPQCSKLKRLDLEANN INTSGAMALATCLQFCPWIEVIRLWRNPIKKDDLILKDKRLNFSST NT seq 5181 nt NT seq  +upstreamnt  +downstreamnt atgaagatggaggagatggacctggaggaggatgttttggatgtggtggaccaggaggct agcacaatagtggacattttgtgtgagcagagagataatgttctacagcggatctttgcc ttggtggatgctcggactcgagagcagttacagcacctaccaaataacagggagtctatc tcaggtcttgtagattacttcagaacatcagaccaacacacatgccgccgttttctggac attatttggtctttctgtgagaatattcccttagagctggacatacgtattgtaaatctt gcaggatctacagctggagcattggtaaacaactctcatgtgccagatactgaaaactcc cctcagtcacgttatggaaaacgtgcacgtctagaccaggtgcagagttacacaaatgct gttaagagttttctgcagaagaaatttgagaaggtgacaaaagatataaagaaagaggtt tgtctaaacaatacatggctgtgctggaggacacaaaaatatgcacgggtgagagacaga ccagcaaagtctcaggaaggggaagaggtttcactagagcataaagagtcggttgaggct ctgttgatgaaaacaggcagagtggtaatgctgtcaggtcaggctggctctggtaaaacc ttgttgatgcattgccttgcccaccactgggctcagggctcttacccctctatcgagcta ctcttcctgctggagtttcgccagctcaacctcatctcacagccattgtctcttaaggag ttgttgtttcgtttctttcttccctctgatgaagacgatgagcaaagtgaagcagtgctc aattatgttctctccaaccctgagaaaatttgctttatatttgatggatatgatgagttt ggggcaagatttaaagacccaaaggagcttgaatgctctgtaaatccttaccagcagctg ccattagctgatctcctctctgcactatgtagcgccaagatcctgcctgggtgcacagtg ctggtcacttgtaggccacgggatgtttttgacctatttggaagttctgattattttgtt gcagagctgcttgggttcaatcaacaacgtgtgaaggaatacactcaggagtacttccaa gaaaagggatgtgaaattaaagaaagagcggttagcttgctgatggacagccatcacctc ctgtccatgtcccatgttccaggattatgtcatgtttgctgtgtctgcttggatcatttc ctcaccagtgatatgtctcagcaacctggcactcagctacctacatccttgacccaaatc tacctccacatcctctctgcttttattagtcgatgccacggttgtggatcctctgataat cataccccattacttcagagatatagggttcaaattgctatgttgagtaagcttgctatg gatggcctggagaacagccgtatcgtattcccggcaaatgaactgactacagagctaatg aactttggtgccaatgctggaattctgtcccgtttggatctcacttgtggagatggatcg cggcgtctgggctgtgcctttacgcacctaaccatacaagagtttatggctgctttgcat cttatgacgaaccccgacatcacagagtcacagctcaagaagaaacttaacctgaaaagc agatggactgctaagactgatccaaaaactgtgttcacagactcccttcacctgtatatg tgtggactcgctgcagaagcttgcacttcaaatcttgtcctgctgaaaggcagtgagaat gccagagctattgttctgaagcgacaagatgctgtacttaagactttgcagcgctttgtg gttagtggccgtcaaacaggtcccaagattattgagctctgccgttgtgcccatgaaaca caaaacattgatttggccagggctattggtccaagagatcggtttgagctgcggaatata agactcaaccctgtggacattgacgccttggcatttgtaatttcatctgcaaatcagatg gtatgtctggactttggcgcctgttacatcgagccagagtgtttgaacatcattcccaac tgcaagaacctggaagagctcaattttcgtagccgtaagtatgatgacaagtttgccgag gctttgtctggtatcctgcccaaacttcagagcctgaagcagttacactttattagtggt ggcctcactaatattggagccgcaaaacttttcaaggcttcggaatgctgcccacaaatc acacgcctcaatgtcagtgataactacctaacagatgaaagcgtaaaaaagatcaccgag ttgtttcccaagctggctaaactcacatctgtcatcttggggaagaacaacatttccata aatggaatatttatactagctggaaaaatggcagcctttccaaacattaaggaagtctat gcaaatgcaaaaaaaaaggaaatcaatgttcagttctctgcaaacaccacaaacagtgcg agcacagatgacctaaacaacactgaagaatcgaagcagctaatcttgaacgactggaat ctcaaatggacaaatgtgcacaatctgtgccctatgctcagaggctgttcctctctcact gtcctaaatttgtcccacaacgcactggggaacagaggtctaaagaagttgcttgaacat cttcctactcttgacaccattcaagaaatcaatgtcagtgacaacggagtggatatggat ggggttgtgcttctctcacctcttctctgtactctcaaagacctgactgaagtagaagct agccacaacggaaagaagatgctggttttgacgtttagttctagcataattgatgcttta aagcaggtaacatcagaggggtgtgatattctgcacaagaaactcagcttaactcatagt gatatacaccccactgacatgaacaagctgtgtaagaatctgatcaagtgcccaaatcct ctaaacctggatttctctcatggaacattaaaggatgagtctactgagaagctactaaag tttcttccaaacatggcatctctcaatctactaaatttaagtcacatccagatgtcaaca gatagtgctttgttattggtccaattgctttctgattgccagcgcactacaactgtggaa ctcagacaactgggagaaacgtttattaagttcctccaagacaaatcagaagctgcaaca tgcaagtttaaccaatataggctgagcagtgccaatctggcaaagctctgtgagatactg gagcactgccatcatctgactgatctggatttgtccagtaacttccttaaagatgaggat gtgaagacctttgttcaatttctgcccaagcttcagatctcaggttcagtgagcctcaac aataacaatctaaccgaagtaggagtactctacctgctgagcctaatgcacacatgtgaa agggtggctgctgtggaagtgagtcttggaaaggaggagcagcaggatattattggcttt gttcagaagaattgtacaggcaaaaccttcaggttatcatcatgcactgtgcaaagtcaa aatgtgctctttctactgaacaagctggctacactgaactcagtgcaaactctagagcta agaaacaattctttcagtgctgacacgattaagtatttgattactgagttctgtggggat tgtaatcatagaacaattcggataatggagccatggattaaaggggaagctgctgtgggc cttgtgcagtgctgcctggaactgaatccaaacataaaggagatcagagttgaaaaaaca tgtcttaaactttctgttgaaagcctcgtctctgccacaatccctaatgaatgggagaat gggaattgttccctttctgctgtgcactgtataagttttgatgactgtgaagttgagggg cagcacttatcctcactacagtctgctctcaggaattgtccctctctgcaggaattacac ttctctcagctgacgatgggtgcagatggtgcagagtttctctcttcagttcttccctcg ctgaagaatctcaagatcctcagtcttagttccaaaggagaaacagaagatgaagcagta atatttgcattacagcatgcacaaaagcacctggaacagctgagcttggcccatcatgta attaaagacagaggagctgcagtattagggaatgcccttcagggttttacaagaatgcga tcactcagtctcttaaagtgcttggattggactgcaacaggagggcgtgatttggtccgt ggtctggtccagtgccactctctggaagaaattcggctggactctatagaattggatgaa gaaagcatagattgctttgcacaaggccttcaggccatgacatcactcaaaaagatcagt ttgaataagacgatctcaaaggagggcagtggggttctgtgtctgctggctagtctgcac ccattaattgagctagaagaaatagaattgattggattgagaatgggtgatcgaggtgtt gaggagcttgtgaaacacatccctaaatggaccagactaagaaaaataaatctgtcagag aaccgtgtgagtgaccatgctggagagatgttggtgaaagcgctgtcccactgcagagca ctgcaacaaatacatcttttcaggaacaaccttggtcacagttctgcagctgtactgggt caggttcttccatccctctctgagctcactgaattggatctatctgagaaccaaatggaa tcaaaaggttgttcaagtgtctgtgaggctctggtcagcatgaaggcactaaaaaaacta cacttaacctccattggaacctcagacttggtcaatgttgcatcttgcctcaaacactgc acctctatagaggacatcagcttgtcatggaataactgtgaaaatgatgtggttctgaaa ctggctgaagttctgccacaatgcagtaaactgaaaagacttgatctggaggccaataat atcaacacatcgggagccatggcccttgctacatgtttgcagttttgtccttggatcgaa gtgatcagactttggaggaatcccattaaaaaggatgacctgattttgaaagacaagagg ctgaatttctcgtcgacctaa

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