Ictalurus punctatus (channel catfish): 100303712
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Entry
100303712 CDS
T04658
Symbol
tlr3
Name
(RefSeq) toll-like receptor 3 precursor
KO
K05401
toll-like receptor 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04217
Necroptosis
ipu04620
Toll-like receptor signaling pathway
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
100303712 (tlr3)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100303712 (tlr3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100303712 (tlr3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ipu04054
]
100303712 (tlr3)
04090 CD molecules [BR:
ipu04090
]
100303712 (tlr3)
Pattern recognition receptors [BR:
ipu04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
100303712 (tlr3)
CD molecules [BR:
ipu04090
]
Proteins
100303712 (tlr3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
Tlr3_TMD
TIR_2
TIR
LRR_9
LRR_LRWD1
MSL3_chromo-like
Motif
Other DBs
NCBI-GeneID:
100303712
NCBI-ProteinID:
NP_001186997
Ensembl:
ENSIPUG00000001137
UniProt:
Q00L02
A0A2D0PES5
LinkDB
All DBs
Position
29:1742703..1749008
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AA seq
905 aa
AA seq
DB search
MAIWNTTLPLLFLCTWVLVPSRAYRSECRVELRKADCSHMNLNTIPQDLPEDISVLDVSH
NRLVELKPSSLTRYRSLEHIDASYNSLKAVPAGLCQATPELWWLTLRHNEVHLLQDRDLR
NCTRLTHLDLSDNRLRLTGEPFSGTENLAFLDVSRNKLTTARLGSRPQLPSLQTLVVAGN
DIADLKKDDFYFLNESSLFRTLSLSSLPLKKVDRGCFKPIAGLQDLVLDGCKLNPSFMSR
LCEELSDTSLRNLSIQFTQQVMLNNSTFKGLGKTNLTILDLSNNNMARITDGAFQWFPML
EYLSLEHNNLKHLTKGTFLGLKSLRKLNLQSALAKGHASPLPVIDDFSFQPLVKLEYLYM
EKTSFREITENIFYGLPCLRELNLGWSSTGLKIVSNTTFASLNGSSLLQMLNLTGMGIKT
LEPGAFSSLGNLEILVLSHNYINQQLTGEEFQGLHSIREIHLSFNQQMITLMSTSFIHVP
TLRTLMLGHALSSNLEVEPSPFRLLVNLTLLDLSNNNIANIKNGLLDGLHHLSVLKLQHN
NLARVWKNANPGGPVLILRDAQNLTVLELDYNGLDEIPMKAFQGLSKLKYLSISGNLLNF
LHDSIFDNLRSLRFLRLQKNLLTSVRRETFGVPLSNLTELFMDHNPFDCTCESILWFNKW
LNTTNTSVPDRAKSYVCNTPSMYFNRSVLDFNPESCKDLVPFQALYVITSSLVLGLMVLA
FLVHFQGWRIQFYWNILVNRTLDINDSRYKRVAECRYEYKAYVVHAQEDRLWVERSLLPL
EDKDFRFFLEDRDAMPGSSRLETIVDNMRISRKILFVVTEALLNDPWCRQFKVHHALHQL
MEENRDSLVLIFLEDVADYRLTQSLMLRKGMLKHRCMLQWPLQKERIPAFRQKLQLALAS
SNRVS
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttggaacaccaccctcccgttgctgtttctctgcacgtgggtgctcgtgcca
agtcgagcttacagaagcgagtgcagagttgagctgagaaaggcggactgcagccacatg
aacctcaacaccatccctcaggacttgcctgaggacatcagtgtcctggatgtgtcccat
aaccggctggtcgagctcaagccctcatctctgactcgataccgcagtctggagcatatc
gacgccagctacaacagcctgaaggcggtgccggcgggtctgtgccaggctacgccagag
ctgtggtggctcacgctgcgtcacaacgaagtgcacctgctgcaagaccgagacctgagg
aactgcacacgcctcacccacctggacctgtccgataacagactgagacttacaggagaa
cccttctcagggacggagaacttggccttcctggacgtatcccgaaacaagctgaccacc
gctcgtctggggtcgcgaccccagctgcccagcttgcagaccctcgtcgtcgccggcaac
gacatcgcagacctgaagaaggacgacttttattttctcaacgagtcctcgttgttccgg
acgctgtctctttcttctctgcctctgaagaaggtggaccgtggctgcttcaagcccatt
gctgggttacaagacctggtgctagatggttgtaagctcaacccttccttcatgtctaga
ctctgtgaggagctgtctgacacctctttgagaaacctgtctatccagtttactcagcag
gtcatgctgaacaacagcaccttcaaaggcctaggcaagaccaacctcacgatcctggat
ctctccaacaacaacatggccagaatcacagatggagcctttcagtggtttcccatgctg
gagtacctctctttagagcacaacaacctgaaacatctgaccaaaggtaccttcttggga
ctgaaaagtctgaggaaactcaacctacagtcggcgctagctaaaggtcatgcgtctccc
ttgcccgtcatagacgacttctctttccagccactggtcaagctggagtatctgtacatg
gagaagacgtcatttagggagatcactgagaatatcttttacggacttccgtgtctgaga
gagctgaatcttggctggagcagcacagggctaaagatagtcagcaacaccacctttgct
tccttgaatggatcttcacttctccagatgctcaatcttacaggtatgggtatcaagacc
cttgagccaggagctttttcaagcttgggaaaccttgagattcttgtgctcagtcataac
tacatcaaccagcagctgacaggggaagagtttcagggtctccacagtatcagggaaatt
catttgtccttcaaccaacagatgatcactttaatgtctacgtcgttcatacatgtaccc
actttgaggactctgatgctcgggcatgccctaagttctaatttggaagtggaaccgtct
ccgtttcgactgctggtcaacctgacgttgctggatctcagtaataataacatcgcaaac
atcaaaaacggcttgctcgatggattacaccatctcagtgtgctgaaactgcagcacaat
aatttggccagggtgtggaaaaatgctaatcctgggggtccagtgctgatccttcgcgat
gctcagaaccttactgttctcgagttggactacaatggtctcgatgagattccaatgaag
gccttccaaggcctctcaaaactaaaatacctcagtattagtgggaatctcctgaatttt
ctgcatgactccatttttgacaacttgcggtctctgcgcttcctgcggctgcagaaaaac
ctcttgacctcagtgcggcgggagacgttcggtgtgccgctgtccaacctgaccgagctt
ttcatggatcataaccccttcgattgcacctgtgagagcattctatggttcaacaaatgg
ctcaatacaaccaacaccagcgtacctgaccgtgccaaaagctacgtctgcaacactcca
tccatgtacttcaaccgttcggtgttggacttcaacccagaatcctgtaaggacctggtc
cccttccaggctttgtatgtaatcaccagctccttagtactaggtctgatggttctagcc
ttcctggtgcacttccagggctggaggattcaattctactggaacattttagtcaatcgc
accctagatataaacgactctcgttataaaagggtggccgagtgcagatatgaatataaa
gcctacgttgtccatgctcaggaggatagactttgggtggaacgaagcttgcttcctctg
gaagacaaggatttcaggttcttcttggaggaccgggatgcaatgccaggcagctccagg
ttagagaccatagtagacaacatgagaatctcccggaaaatcctttttgttgtcacagag
gcgcttttgaacgatccctggtgtagacagtttaaagtccaccacgcccttcaccagtta
atggaagaaaatcgagactcgctggttctgattttcctggaggatgtcgcagattaccgc
ctgactcagtcgctcatgttgcgtaaaggcatgctaaaacaccgctgcatgctccagtgg
cctctgcaaaaagagcgcatcccggctttccgccagaagctacagctagcgttagcctcg
agtaaccgggtcagctaa
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