Ictalurus punctatus (channel catfish): 100304471
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Entry
100304471 CDS
T04658
Symbol
parapinopsina
Name
(RefSeq) parapinopsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ipu04030
]
100304471 (parapinopsina)
G protein-coupled receptors [BR:
ipu04030
]
Rhodopsin family
Vision
Opsin
100304471 (parapinopsina)
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srv
7tm_4
TAS2R
Motif
Other DBs
NCBI-GeneID:
100304471
NCBI-ProteinID:
NP_001187002
Ensembl:
ENSIPUG00000024392
UniProt:
O42266
LinkDB
All DBs
Position
5:complement(9829482..9836847)
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AA seq
346 aa
AA seq
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MASIILINFSETDTLHLGSVNDHIMPRIGYTILSIIMALSSTFGIILNMVVIIVTVRYKQ
LRQPLNYALVNLAVADLGCPVFGGLLTAVTNAMGYFSLGRVGCVLEGFAVAFFGIAGLCS
VAVIAVDRYMVVCRPLGAVMFQTKHALAGVVFSWVWSFIWNTPPLFGWGSYQLEGVMTSC
APNWYRRDPVNVSYILCYFMLCFALPFATIIFSYMHLLHTLWQVAKLQVADSGSTAKVEV
QVARMVVIMVMAFLLTWLPYAAFALTVIIDSNIYINPVIGTIPAYLAKSSTVFNPIIYIF
MNRQFRDYALPCLLCGKNPWAAKEGRDSDTNTLTTTVSKNTSVSPL
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcatccattattctaatcaacttttcagagactgacacactgcatctcggctcagta
aatgatcacatcatgccaagaataggctacaccattttgtcaataattatggctttgtcc
tccacttttggcatcatcttgaatatggtggtgattattgtgacagtgcggtacaaacaa
ctgcgtcagccactaaactatgctctggttaatctagcagtggctgatcttggctgtcct
gtgtttggggggctactcacagcagtcaccaatgccatgggctacttcagtcttggcagg
gtaggatgtgttttggaaggatttgctgttgccttctttggtattgctggtttgtgctcg
gtcgcagttattgctgttgaccgctacatggtagtatgcagaccattaggtgcagtgatg
ttccaaaccaaacatgccctggcaggcgtggttttttcctgggtctggtccttcatatgg
aacacgccaccactgtttggatggggcagttaccagctggagggtgtgatgacctcctgt
gctcccaactggtacaggagagacccagtcaatgtctcctatatcctgtgctacttcatg
ctctgttttgcgctgccttttgccaccattatcttctcttacatgcacctccttcatacc
ttatggcaggtggctaagttgcaagtggcagacagtggaagcacggccaaggttgaggtt
caagtggcccgtatggtggtcatcatggtcatggcctttttgcttacatggctgccatat
gcagcctttgccctgactgtgatcattgattcaaacatctatatcaacccagtgattggc
acaatacccgcatacctggccaagagcagcactgtctttaaccccatcatttatattttc
atgaacagacagttcagggactatgctttgccttgtcttttatgtggaaaaaacccttgg
gcagccaaagaaggacgagactcagacaccaatacattaactactacagtcagcaagaac
acctcagtgtcaccattataa
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