Ictalurus punctatus (channel catfish): 100304474
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Entry
100304474 CDS
T04658
Symbol
esr1
Name
(RefSeq) estrogen receptor
KO
K08550
estrogen receptor alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
100304474 (esr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
100304474 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ipu03310
]
100304474 (esr1)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
100304474 (esr1)
Nuclear receptors [BR:
ipu03310
]
3. Estrogen like
3A. Estrogen receptor
100304474 (esr1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Oest_recep
zf-C17orf113
Motif
Other DBs
NCBI-GeneID:
100304474
NCBI-ProteinID:
NP_001187003
Ensembl:
ENSIPUG00000019477
UniProt:
Q9YHZ7
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Position
25:complement(16995798..17027572)
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AA seq
617 aa
AA seq
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MSEEQARAEAPAGARQRRRSELEGYSVSLASLKLSPMYPEEEQRTTGGISSTAHYLDGTF
NYTTNPDATNSSVDYYSVAPEPQEENLQPLPNGSSSPPVFVPSSPQLSPFLGHPPAGQHT
AQQVPYYLEPSGTSIYRSSVLASAGSRVELCSAPGRQDVYTAVGASGPSGASGPSGAIGL
VKEIRYCSVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYVCPATNQCTIDRNRRKSCQ
ACRLRKCYEVGMMKGGFRKERGGRIIKHNRRPSGLKERERGYSKAQSGSDVREALPQDGQ
SSSGIGGGVADVVCMSPEQVLLLLLRAEPPTLCSRQKHSRPYSELTIMSLLTNMADRELV
HMIAWAKKVPGFQDLSLHDQVQLLESSWLEILMIGLIWRSIYTPGKLIFAQDLILDKSEG
ECVEGMAEIFDMLLATVARFRTLKLKSEEFVCLKAIILLNSGAFSFCSSPVEPLRDGFMV
QCMMDNITDALIYYISQSGISVQLQSRRQAQLLLLLSHIRHMSYKGMEHLYSMKCKNKVP
LYDLLLEMLDAHRLRPLGKVPRIWADRVSSSPTTTATTPTTNTTTTTTTTTHHPSNGSTC
PADLPSNPPGPGQSPSP
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagagcaggctcgcgctgaagctccggctggtgccaggcagcgacgcaggagc
gagctagaagggtattcggtgtctctcgcttccctcaagctctcgcccatgtacccggag
gaggagcagcgcaccacggggggcatttcctccaccgctcactacctagacgggacgttc
aactacaccaccaaccccgatgccaccaactcgtcagtggactactactcagtcgcccca
gagcctcaggaggagaacctgcagccgctgcctaacggctccagcagccctccggtgttc
gttccttccagcccgcagctctcgccgttcctcggccatcctcccgcaggacaacatact
gctcagcaggtgccgtactacctggaaccatcaggaacctccatctacaggtccagtgtg
ttagccagtgcaggatcacgagtggagctgtgcagcgcccccggcaggcaggatgtgtac
accgcagtgggagcctcgggaccatcgggagcttcggggccttcaggagcaatcgggttg
gtgaaggagatccgctactgttcggtgtgcagtgactacgcctcagggtaccactacgga
gtctggtcgtgcgagggctgcaaggccttcttcaagcgcagtatacaaggtcacaatgat
tacgtgtgtccagcgaccaaccagtgcaccatcgacaggaaccgcaggaagagctgtcaa
gcgtgtcgtctacgcaagtgctacgaagtgggcatgatgaaaggaggttttcgtaaggag
cgtggcggtcgcatcatcaagcacaacaggaggccgagtggactgaaggagcgggagcga
ggttatagcaaagcccagagcggttctgatgtgagagaagcgcttccacaggacgggcag
agcagttccgggatcgggggaggggtagcggacgtggtctgcatgtctccggagcaggtg
ttgctgctgctgttgcgggcggagccgcccaccctgtgctcacgacagaaacacagccga
ccctacagcgagctcaccataatgagtctgctcaccaacatggccgacagggagctcgtt
cacatgatcgcctgggccaagaaagtgcctggattccaggacctctctctgcatgaccag
gtacagctgttggaaagctcctggctggagattttgatgattggtctcatctggaggtcc
atctacacacctggaaaactcatcttcgctcaggacctcatcctcgacaagagtgaagga
gagtgtgtggagggcatggctgagatattcgacatgctgctggccacagtggcccgtttc
cgcaccctcaaactcaagtcagaggagtttgtgtgtctcaaagccatcatcctgctcaac
tctggtgcgttttcgttctgctcctcccccgtcgagcccctgagggacggcttcatggtg
cagtgcatgatggataacatcacggatgccctcatatactacatcagccaatcgggaatc
tcggtgcagctccagtcccggcgtcaagcccagctcctgcttttgctctcgcacatcaga
cacatgagctataaagggatggaacacctgtacagcatgaagtgcaagaacaaagttcct
ctgtatgacctgctgctggagatgttggacgcgcataggctccgccccctgggcaaagtg
ccaaggatctgggccgatcgagtgtcgtcttcacctactacaaccgccacaaccccaacc
accaacaccaccaccaccaccaccaccaccacccatcaccccagcaacggctccacgtgt
cccgcagacttaccgtccaacccgccgggtcccggccaaagccccagcccatga
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