Ictalurus punctatus (channel catfish): 100304487
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Entry
100304487 CDS
T04658
Symbol
itgb2
Name
(RefSeq) integrin, beta 2 precursor
KO
K06464
integrin beta 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04145
Phagosome
ipu04514
Cell adhesion molecule (CAM) interaction
ipu04517
IgSF CAM signaling
ipu04518
Integrin signaling
ipu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100304487 (itgb2)
04517 IgSF CAM signaling
100304487 (itgb2)
04518 Integrin signaling
100304487 (itgb2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100304487 (itgb2)
09142 Cell motility
04810 Regulation of actin cytoskeleton
100304487 (itgb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
100304487 (itgb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
100304487 (itgb2)
04515 Cell adhesion molecules [BR:
ipu04515
]
100304487 (itgb2)
04090 CD molecules [BR:
ipu04090
]
100304487 (itgb2)
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
100304487 (itgb2)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100304487 (itgb2)
Cell adhesion molecules [BR:
ipu04515
]
Integrins
Integrin beta subunits
100304487 (itgb2)
CD molecules [BR:
ipu04090
]
Proteins
100304487 (itgb2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
EGF_integrin
EGF_2
EGF_TEN
I-EGF_1
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
100304487
NCBI-ProteinID:
NP_001187010
Ensembl:
ENSIPUG00000008568
UniProt:
Q9PUU4
LinkDB
All DBs
Position
6:complement(28755830..>28771058)
Genome browser
AA seq
772 aa
AA seq
DB search
MPQAAKIVLLLLFGQYVYSQEKECIKSSVVSCKDCINSGPGCAWCQELNFTKTGEPEAVR
CDTEEKLKEKGCSQQKIISPSSHLENVANKPLSGSDRTKNPVQVQPQEIKLNLRPGQAFT
FNLQFKRAVGYPVDLYYLMDLSYSMEDDLTNVKDLGIQILKRLQQITGNARIGFGSFVDK
TLLPFTDTTEEKLKKPCPAKRKQCQPAFGYHHVLSLTQNETLFSTMVSGQEISGNLDTPE
GGLDAIMQVATCVNKIGWGNSTRLLVLATDAGFHKAGDGKLAGILEPNQETCQLDNKNIY
SMSNNWDYPSVGQIARKLGEETIQPIFAVTEDVSHIHQELSKLIPKSEVGVLSSDSSNVV
KLIVDAYNKLSSNIIVTHDGLPEDISVTFTSNCPGGEKPSDRGTCNNVAIGQGVTFSVTV
KAAKCLDKAYFQTGPLGFSEKLKVNIKTRCECECDNQPGVQLYCNQHGTIVCGTCSCVPG
FLGQRCECSLGQKDEATLKAQCRKDNGTECEGRGDCECGVCKCHQTEGGKSYYGPHCECD
DEHCEKYQNKLCGGNGDCRCGVCKCNEGYEGTACQCKKSNEFCETGKTICHGRGKCVCNQ
CVCERRYKGITCETCPTCELPCQESGSCVECNAFGTGPFEKTCNASCYHLDVEVVEKLAK
RECQVKDNEGCRMIFSMTEQDGFDKYIVKVLKDRECPEGPNVALIVGGTLAGVALIGLLL
LILIKALFYFKDLKEWKKFEKEAQRRQWAKGENPLFQNATTTVANPAFTGDS
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgccacaggcagcaaagatcgttctcctgctgttatttggacaatatgtctactctcag
gagaaggaatgtataaaatcatcagtggtgtcttgtaaagactgcataaattctggacca
ggatgtgcttggtgtcaggaattgaatttcacaaagactggggagccagaagcagtacga
tgtgatacagaggaaaagcttaaagaaaaaggttgctcacaacaaaagataatcagccca
tccagtcacttggaaaatgttgcgaacaaaccactgtcagggtcagacaggacgaaaaac
ccagttcaggtgcagccacaagaaattaaactcaatttacgaccaggtcaagccttcacg
ttcaatctccaatttaaaagggcagtgggttaccctgttgatctgtactatctgatggat
ttgtcatactcaatggaggatgacttgacgaatgtgaaagatttgggaatacaaatactt
aaacgcctgcagcaaatcactggaaatgcaaggataggctttggctcatttgttgataaa
acacttcttccgttcactgacacaaccgaagagaagttaaaaaagccctgtccagccaaa
cgaaaacaatgtcagccagcatttggctatcatcatgtcctcagcctgacacagaatgag
acacttttcagtacaatggtgtctggacaggaaatatctggcaacttggacacaccagag
ggaggcctggatgccatcatgcaagtcgccacctgtgtgaataagatcggctggggaaac
agcacgcggctgctggtgcttgccactgatgctggtttccacaaggcaggtgatgggaaa
cttgccggcatcctcgaacccaaccaagagacttgtcagctggataataaaaacatctac
agcatgagcaacaattgggattacccatctgttggtcagatagccaggaagttgggagag
gaaaccatacagcctatttttgctgtaactgaagatgtgtcacacatacaccaggagctg
agtaaactgattcctaaatcggaagttggagtactgagttcagattcaagcaatgtggta
aaactaattgtggatgcatacaacaaactctcctctaatataattgtgacccatgatgga
ctcccagaagacatatcagtaacattcacatctaattgtccgggaggagagaagcctagt
gatagggggacatgcaacaatgtcgccattggacaaggggtgactttcagtgtaactgta
aaggcagcaaaatgcctagataaagcatactttcaaactggtccactgggattcagtgaa
aaactgaaggttaacattaagacacgatgtgagtgtgagtgcgacaaccagcctggtgta
cagctgtactgtaatcaacatggcacaattgtctgtggcacatgcagttgcgtccctggc
ttcctgggacagcggtgtgagtgcagcttgggtcagaaagatgaggctactctaaaggct
caatgccgcaaagacaatgggacagagtgtgagggccgtggagactgcgagtgtggagtg
tgcaagtgccaccaaaccgaggggggcaaatcctactatggtcctcactgtgaatgcgat
gatgaacactgcgaaaagtaccaaaacaaactgtgtggaggtaatggggactgcagatgt
ggagtatgcaaatgcaatgaaggctatgaaggaacagcctgtcagtgcaagaaatctaat
gaattttgcgagacgggaaaaaccatatgtcatggacgtggcaagtgtgtgtgcaaccag
tgtgtttgcgagaggcgatacaagggaatcacatgtgagacgtgtcccacctgtgaatta
ccatgccaagagtcggggagttgtgttgaatgcaatgcatttgggacgggaccatttgag
aagacatgcaacgcgtcctgctaccaccttgacgttgaagtagttgaaaaactggcgaaa
agggagtgccaagtgaaggacaacgagggctgccggatgatcttctcaatgactgagcaa
gatggatttgacaaatatattgtgaaagtccttaaagacagagaatgtcccgaggggcca
aatgttgcactcatcgtgggtgggactctggctggtgtggcactgattggacttctactc
ctcatcctcattaaggcactattctatttcaaagacctcaaagagtggaagaagtttgaa
aaggaagcacaacgccgtcagtgggcaaaaggtgaaaatccattattccaaaacgcaaca
acaactgttgcaaatccagcatttactggagactcttaa
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