Ictalurus punctatus (channel catfish): 100304492
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Entry
100304492 CDS
T04658
Symbol
itgb1
Name
(RefSeq) integrin, beta 1 precursor
KO
K05719
integrin beta 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03271
Virion - Rotavirus
ipu04145
Phagosome
ipu04510
Focal adhesion
ipu04512
ECM-receptor interaction
ipu04514
Cell adhesion molecules
ipu04530
Tight junction
ipu04810
Regulation of actin cytoskeleton
ipu04820
Cytoskeleton in muscle cells
ipu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
100304492 (itgb1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100304492 (itgb1)
04514 Cell adhesion molecules
100304492 (itgb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100304492 (itgb1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
100304492 (itgb1)
04530 Tight junction
100304492 (itgb1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100304492 (itgb1)
04810 Regulation of actin cytoskeleton
100304492 (itgb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100304492 (itgb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
100304492 (itgb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
100304492 (itgb1)
04515 Cell adhesion molecules [BR:
ipu04515
]
100304492 (itgb1)
04090 CD molecules [BR:
ipu04090
]
100304492 (itgb1)
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
100304492 (itgb1)
Exosome [BR:
ipu04147
]
Exosomal proteins
Proteins found in most exosomes
100304492 (itgb1)
Cell adhesion molecules [BR:
ipu04515
]
Integrins
Integrin beta subunits
100304492 (itgb1)
CD molecules [BR:
ipu04090
]
Proteins
100304492 (itgb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
100304492
NCBI-ProteinID:
NP_001187015
Ensembl:
ENSIPUG00000012386
UniProt:
Q9IA01
A0A2D0PET0
LinkDB
All DBs
Position
20:10699247..10780078
Genome browser
AA seq
797 aa
AA seq
DB search
MKVMVVLMTVLLGFFSFCSAQLDGNDCTKASAQSCGECIQVGEKCGWCTYESFLKQGESK
STRCDEIEALIKKGCPTNNVENPRGTVVANENKTVTNRKKDVVEKLKPDQITQIQPQKLT
LNLRAGEPQKFSLKFKRAEDYPIDLYYLMDWSYSMKDDLENVKNLGTDLMREMQSVTSDF
RIGFGSFVEKTVMPYISTTPAKLLNPCTSDQNCTSPFSYKNVLSLTEDGRQFNSLVSRQQ
ISGNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGE
CHLKDNLYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
SANSSNVIKLIIDAYNSLSSEVILENSKLPEGVSISYVSHCINGVSETGDNGRKCSNISI
GDEVTFDIAITSKGCPSHGTSEVKIKPLGFNEEVVVVLNFICECECSKKGIPKSPDCHFG
NGTLECGACRCNEGRIGRVCECSKDDVRAEDLDANCRMDNGTDICSNNGDCICGTCECKK
RDNPEERYEGKYCECDNFNCDRSSNKLCGGHGQCVCRVCVCDANYTGSACDCPLDKQPCV
ASNGQICNGRGTCDCGVCKCTDPKFQGPTCEICPTCPGVCTEHKPCVQCRAFNTGEMKDE
CEEKCNYFKLTMVKEKEDLPQPNSKPYLSHCKERDANDCWFFFIYATKNVSVEVYVVEQL
ECATGPDIIPIVAGLVAGIVLIGLALLFIWKLLMIIHDRREFAKFEKEKMNAKWDAGENP
IYKSAVTTVVNPKYEGK
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgatggtggtgttgatgactgttctgctggggttcttctccttctgttcagct
caactagatggtaatgattgcactaaggcttcagctcagtcttgtggtgaatgtattcag
gttggagaaaagtgtggctggtgcacctatgagtcctttctgaagcaaggtgaatcaaaa
tcaacacgctgtgatgaaattgaggctctgattaagaagggctgtcctacgaacaatgtg
gaaaatcctcgagggacagtcgtggccaatgagaacaaaacggtcacaaaccgtaaaaaa
gatgtagtcgagaaactgaaaccggaccagatcactcagattcaacctcagaagctcaca
ctgaatctaagagcaggtgagcctcaaaaattttccctgaagtttaaaagggcagaggat
tatcccattgacctgtactacctgatggactggagttactccatgaaggatgatttggag
aatgtgaagaatttgggaacggacctgatgcgtgagatgcagtcagtcacatctgacttc
aggattggttttggttcatttgtggaaaagactgtgatgccctacatcagtacaacccct
gctaagctgctgaatccctgtacttccgatcaaaactgcacaagccccttcagctataaa
aatgtattaagtctgactgaggatggtcgccagtttaacagcctagtcagccggcaacag
atttctggaaacctggactcacccgagggaggctttgacgccatcatgcaagttgctgtc
tgtggggaacagattggttggaggaatgtcacccgactactagtgttttcaacagacgct
ggctttcactttgcgggagacggtaaactgggtggcattgtgcttcccaatgatggagaa
tgccacctgaaggataatctatacacaatgagccattactatgactacccttcaattgca
caccttgtacagaaactgagcgacaacaacattcagaccatctttgctgtgactgaggag
ttccagcccgtctataaggagcttaaaaatcttattccaaagtcagctgtgggaacgttg
tctgcgaactccagtaatgtgatcaaacttatcattgatgcctacaattctctgtcatcc
gaggtgatcctggagaacagcaagctgcctgagggagtgtccatctcatacgtgtcccac
tgcataaacggagtgagtgaaacgggagacaatggaagaaagtgctcaaatatctccatt
ggtgatgaggtgacctttgacatagccatcacctctaagggctgcccatcacatggtaca
tcagaggtgaagatcaagccactgggcttcaatgaggaggtagtggttgttctaaacttc
atctgtgagtgtgaatgttccaaaaaaggaatacccaaaagtcctgactgtcactttggc
aatggaaccctcgaatgtggagcatgcagatgcaatgagggacgtattggaagggtttgt
gaatgtagcaaagatgacgtcagggcagaggatctggatgcaaactgccgcatggacaac
ggcacagatatctgtagcaacaatggagactgtatctgtggaacatgtgaatgcaagaag
cgagacaacccagaggagcggtatgaagggaagtactgtgaatgtgacaacttcaactgt
gaccgatccagcaacaaactatgcggaggtcatggtcagtgtgtatgcagagtgtgcgtg
tgtgatgcaaattacacaggcagtgcatgtgattgtcccctggacaagcagccctgtgtg
gccagtaatgggcagatctgcaatggtcgtggcacctgtgactgtggagtgtgtaaatgc
accgacccaaagttccagggtcccacctgtgagatttgccccacttgtcctggagtctgc
acagaacacaaaccctgtgttcagtgccgtgcatttaacactggagagatgaaagatgaa
tgtgaagagaaatgcaactactttaaactaacaatggtgaaggaaaaggaggatcttcct
cagccaaacagcaagccctatctcagtcactgcaaagagcgtgatgccaatgactgctgg
ttcttcttcatttatgccaccaagaatgtcagtgttgaggtctatgtggtcgaacagctg
gaatgcgctactggtcctgacattatcccaattgtagcgggtttggttgcaggcatcgtt
ctgattggtctggccttgcttttcatctggaagctgctcatgattattcatgaccgcaga
gagttcgcaaagtttgagaaagagaagatgaatgccaagtgggatgcgggtgagaatccc
atttataagagtgcagtgactaccgtggttaatccaaaatacgagggaaaatga
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integrated database retrieval system
