Ictalurus punctatus (channel catfish): 100304590
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Entry
100304590 CDS
T04658
Symbol
pou2f1
Name
(RefSeq) POU domain, class 2, transcription factor 1
KO
K09364
POU domain transcription factor, class 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100304590 (pou2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
100304590 (pou2f1)
03021 Transcription machinery [BR:
ipu03021
]
100304590 (pou2f1)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
100304590 (pou2f1)
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
100304590 (pou2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Peptidase_M50B
Motif
Other DBs
NCBI-GeneID:
100304590
NCBI-ProteinID:
NP_001187099
Ensembl:
ENSIPUG00000011393
UniProt:
O57602
LinkDB
All DBs
Position
26:complement(8193751..8215105)
Genome browser
AA seq
623 aa
AA seq
DB search
MENGIHGVQAAQTNGLDSQQKPNGQATSAISNIQAQALLQQLSLSSAQQQQLFLQQAQQI
LAAAVQQQQQQTANQQSSTTGANISASAATPITQIPLSQPIQIAHQLQPTGLNLQQFVLV
QPGQLQPAQFIISPSPQGQTGLLQGLQAQNLLTQLPQSQAHILQPQSSIALTTQAATPTR
KIAAMPSAAPTTTKRVDVPLVEEASELEELEQFAKAFKQRRIKLGFTQGDVGLAMGKLYG
NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENMTSESAVSSPSDMSPGICEGLNR
RRKKRTSIDTNIRIALEKSFLEQSQKPTSEEITMIADQLNMEKEVVRVWFCNRRQKEKRI
NPPSSSTSNTPIKTVFTNSSPSVISSSSNTLNASSALSLSTASVPNFTLAGTTLGPVTSN
TATVISLAPAVATPAPTMTSPSLTPSATVATLTATKQEVVRTTETGSTIATSAAQGPGQF
VMSPAGLGGANLAAMAAAAGLNPGIISPSQLTQGGALLSLAPASLGNALTPTALMNNTTL
ATIQALASGGALPITSFDGNGNVLFANTSAGGPILFNSPLSLLPTGVLSAGGAGGGALNL
QVTGDAHQSAMPVKSITVASKAQ
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggagaatggaatacatggagtccaagctgctcaaacaaacgggctggactcgcagcag
aaaccaaacggacaagcaacaagtgcaatcagcaacatacaggcacaagccttgctccag
cagttgagtctgagttcagcgcagcagcagcagttgtttctgcagcaggctcagcagatc
ctggcagccgctgtgcagcagcagcagcagcagacagcaaaccagcagagcagcaccact
ggagccaacatctctgcatctgctgctacacccatcacccagatccccctctctcagcct
atccagatcgcacaccagctgcagccgacgggtcttaacctgcagcagttcgtgttggtg
cagccgggacagcttcagcctgctcagtttatcatctccccttcacctcaaggccagact
ggccttcttcaaggccttcaagcccagaatcttctgacacaactacctcaaagtcaagcc
cacatcctgcagcctcagtccagcattgctctgactacacaggcagcgacacctacacga
aagatagctgccatgccatctgctgctccaaccacaacgaagcgggtggatgttcctcta
gtggaggaggccagtgaactggaggagctagagcagtttgccaaggcctttaaacagaga
aggattaaactgggctttactcagggagacgttggcttggccatgggaaagctgtacggg
aacgactttagccagaccaccatctcccgttttgaggctttgaacttgagcttcaagaac
atgtgcaagctcaaacctctgctggagaagtggctcaatgacgcagaaaacatgacttca
gaatcggcagtttccagccccagcgacatgtccccaggcatttgtgagggtctaaatcga
cgccgtaagaaaagaaccagcattgataccaacattcgcattgccttggagaaaagcttt
ctggagcagagccaaaagcctacctctgaggagataacaatgatcgcagatcagctcaac
atggaaaaggaggtggtgagagtgtggttctgtaaccgccggcagaaggagaagaggatc
aaccccccgagcagcagcacatccaacacccccatcaaaaccgtctttaccaactcctcc
ccgtcagtgatatccagttcatcaaacacactgaatgccagttcagcactctctctcagc
actgcctctgttccaaacttcacacttgctggtacaactctaggaccagtcacctcaaac
actgcaacagtcatctctttggcacccgctgtcgccactccagctccgactatgacgtct
ccgtcgcttactccctctgctacagtagcaactctgaccgctacaaaacaggaagtggtc
aggacaacagagactggttccaccattgcaacatcagctgcacaggggcctgggcagttt
gtcatgtctccggcagggctaggtggagcaaatctggcagccatggcggctgcagcagga
cttaacccagggattatttcaccctcccagctaacacaggggggagcattgttaagctta
gctccagcatctcttggcaatgctctgactcctacagcactgatgaacaacaccacactg
gccactattcaggctcttgcatctgggggggcgttacccataacctcttttgatggaaac
ggcaacgtgctctttgccaacaccagcgcaggaggtcccattctgttcaactcacccctg
tctctgcttcccaccggtgtgctttcagcgggcggagctgggggcggggctctcaaccta
caggttactggtgatgcgcaccagagcgctatgccagtcaaaagcatcactgtggcctcc
aaggcgcaatga
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