Ictalurus punctatus (channel catfish): 100304631
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Entry
100304631 CDS
T04658
Symbol
ccl20l
Name
(RefSeq) C-C motif chemokine 20-like
KO
K14625
C-C motif chemokine 20
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100304631 (ccl20l)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ipu04052
]
100304631 (ccl20l)
Cytokines and neuropeptides [BR:
ipu04052
]
Cytokines
Chemokines
100304631 (ccl20l)
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Gene cluster
GFIT
Motif
Pfam:
IL8
FAM60A
Gp_UL130
CXCL16
INTS5_N
Motif
Other DBs
NCBI-GeneID:
100304631
NCBI-ProteinID:
NP_001187124
Ensembl:
ENSIPUG00000007562
UniProt:
Q672Y0
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All DBs
Position
7:8919849..8921978
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AA seq
107 aa
AA seq
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MFCLMTDALSLYSNLNGPLKHACCVKYTRTPVNFNQIKGFAEQSSREVCRIDAIIFLTKR
NQKVCASAKDEWVRNILARLSSKMKKMSQQPHNKVNHTPTWSTSTNV
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgttctgtctcatgacagacgcattgtcgctttacagtaatttaaatgggccgctgaaa
catgcctgctgcgtcaaatacactcgcacaccagtgaatttcaatcagatcaaaggtttc
gcggagcagagttcccgcgaggtgtgccgcatcgacgccatcatattcctgacaaagcgt
aaccagaaagtgtgtgcatctgcaaaggacgagtgggtgcggaacatcctagcacgtctg
agctctaaaatgaaaaaaatgtctcagcaacctcataacaaggtcaaccataccccaact
tggagtacctccacaaatgtgtga
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