Ictalurus punctatus (channel catfish): 100304830 Help Entry 100304830         CDS       T04658                                  Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu03040   Spliceosome Brite KEGG Orthology (KO) [BR:ipu00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     100304830  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ipu03021]     100304830    03041 Spliceosome [BR:ipu03041]     100304830    03036 Chromosome and associated proteins [BR:ipu03036]     100304830 Transcription machinery [BR:ipu03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      100304830 Spliceosome [BR:ipu03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     100304830  Complex B     100304830  Complex C    U2 SnRNP specific factors     100304830 Chromosome and associated proteins [BR:ipu03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      100304830     TFTC complex      100304830 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_BBS7 Beta-prop_WDR3_2nd Motif Other DBs NCBI-GeneID:  100304830 NCBI-ProteinID:  XP_017321894 Ensembl:  ENSIPUG00000020435 UniProt:  W5U7N2 LinkDB All DBs Position 4:complement(12646900..12682642) Genome browser AA seq 1217 aa AA seqDB search MFLYNLTLQRATGITHAIHGNFSGTKQQEIVVSRGKILELLRPDANTGKVHTLLTMEVFG IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHSSKNMFEKVHQETFGKSGCRRIVPGQF LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATAMCVLKTGFLFVASEFGNHYLYQ IAHLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPLDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQYTPRRFVIHPETNNLVLIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPEAIFGAPKAGSGQWASLVRLINPIQGNTLDLVQLEQNEAAFSVAVCRFANGG DDWYVLVGVARDMILNPRSVGGGYIYTYRLVGGGEKLEFVHKTPVEDVPLAIAPFQGRVL VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVSDIQESLFWVRYKRNENQ LIIFADDTNPRWVTTACLLDYDTMAAADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG LLNGASQKADVIMNYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgtttctgtacaacctgaccttgcagcgtgctactggcatcactcatgccatccatggc aacttctcaggtaccaagcagcaggagattgttgtttctcgaggaaagattctggagctg ctgcgtcctgatgcaaacacgggaaaagttcacacactgctcaccatggaggtattcggc atcgtccgctctctcatggccttcaggctgacaggtggcacaaaagactacatcgtggtg ggcagtgattcaggacgtattgtcatcctggagtatcactcctccaagaacatgtttgaa aaggtgcaccaggagacctttggcaagagtggctgtagacgcattgttcctggacagttc ctggctgtggatcccaaaggcagagctgttatgatcggtgctatagagaagcagaaattg gtgtacattctgaacagagatgcagctgctcgcctcaccatctcctcccctctggaagcg cacaaggctaacacactcgtctaccatgtggttggggtggatgttggttttgagaacccc atgtttgcctgtcttgagatggactatgaggaagctgataacgaccccacaggtgaagca gcagctaacacacagcagactctgaccttctatgagttggacctgggactcaaccacgta gtgcgcaagtacagcgaggctctggaagagcatggaaacttcctcatcacagtgccaggt ggctctgatggtccgagtggagtgctcatttgctcagaaaattacatcacttacaagaac tttggggaccagccggatatccgctgcccaatcccacgcagaaggaatgacctggatgat ccagagaggggcatgatcttcgtctgctcagccacacacaaaaccaagtccatgtttttc ttccttgcccagactgagcaaggagacatcttcaaggttaccctggaaacagatgaggag atggtcacagagatcaggatgaaatactttgacaccatcccggtggccactgccatgtgt gtgctgaagactggcttcctgtttgtggcatcagagtttggaaaccattatctgtatcag atagcccacctgggtgatgatgacgacgaaccagagttttcttctgccatgcctctggaa gaaggagacacctttttcttccagccacgaccgcttaagaacctggtgcttgtggacgaa caggagaacctttcccccatcatgtcctgccagatcgctgatttggccaacgaggacaca cctcagctatatgtggcatgtggtagaggaccaagatctacgctaagggttcttaggcat ggtctggaggtctcagagatggctgtgtcagaacttcctggtaaccctaatgctgtgtgg actgtgaggaggcatgtagaagatgagtttgacgcctacatcattgtgtccttcgttaac gccacactggtgctgtcaatcggagaaactgtggaagaagtgactgactctggcttcctg ggtactaccccaactttgtcctgttctctgcttggggaggatgctctggtgcaggtctac ccagatggtattcgccatatccgagcagataagcgtgtgaatgagtggaagactccagga aaaaagacaattgtgcgctgtgctgtgaaccagcggcaggtggtcattgccctgactgga ggagagctggtgtactttgagatggacccgtcaggtcagctgaatgagtacactgagaga aaggagatgtctgcggatgtggtgtgcatgagccttgcgaacgttcccccgggtgagcag cgctcacggttcctggctgtgggcttggtggataacactgtgcggattatctcactagac cccttggattgtctacagccactgagtatgcaggctctgcctgcacagccagaatctcta tgtatagtggagatgggaggtgtggagaaacaagatgagttgggagagaaaggtaccatc ggctttctctacctcaacattggcttgcagaacggtgtgttactccgcactgtgctggac ccagtgactggagacctgtctgacactcgcacacgctatctgggctctcgaccagtgaag cttttcagagtgcgaatgcagggccaggaggctgtgttggccatgtccagtcgatcatgg ctgagctactcctaccagtcacgtttccatctgacgccactttcatatgaaaccctggag tacgcctcagggtttgcttcagagcaatgtcctgaaggcattgtggccatctctaccaac accttgagaattctggctctggagaagctgggtgctgtttttaatcaggtagcttttccg ctccagtatacaccacgcagatttgtcattcacccagagaccaacaacttggtcctcatt gaaactgaccacaatgcttacactgaagccaccaaggcccagcgcaagcagcagatggca gaggaaatggtggaggctgccggagaggatgagagggagctggctgcagaaatggctgct gcctttttgaacgagaaccttccagaagccatctttggtgccccaaaggctggctcagga cagtgggcctcactggtgcgcctgatcaaccccatccagggcaacaccctggatttggtt cagctggagcagaatgaagcagcctttagtgtggctgtttgtcgctttgccaatggaggt gatgactggtatgtgttggtgggtgtggcaagagacatgatccttaacccacgctcagtg ggcggtggctacatttatacctaccgcctggtaggaggtggtgaaaagctggagtttgta cacaagaccccagtggaggatgtgcccctggccatcgcccccttccagggcagagtgttg gtgggggtcggcaaactgctgcgcatctatgaccttggcaaaaagaagctgctccgcaag tgtgagaacaagcatgttcctaacctggtgacgggcatccacaccattggccagcgtgtg attgtgtcagacatccaagaaagtctattctgggtgcgctacaagcgcaatgaaaaccag ctcatcatctttgctgatgacacaaacccacgctgggttaccaccgcctgtctgctcgac tatgacaccatggctgcagctgacaagtttgggaatattagtattgttcgtctaccacca aataccagtgatgatgtggatgaggaccccacagggaacaaagcattgtgggacagaggc ctgctcaatggagcctcccaaaaggctgatgtaattatgaactatcacataggagaaaca gtcctgtcactacagaagaccacgctcatccctggaggctcagagtctctggtgtacacc actctctcaggtggcattggcatccttgtgcccttcacctctcatgaggatcatgacttc ttccagcacttagaaatgcacatgcgctcagagtttcctccactttgtggccgagaccat cttagcttccgctcctattatttccctgtgaagaatgtaattgatggagatctctgtgag cagtttaactccatggatccccacaagcagaaaagtgttgctgaagagttggaccgcaca ccaccagaagtgtctaagaaactggaagacatccgcacacgttatgccttttaa

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