Ictalurus punctatus (channel catfish): 100304841 Help Entry 100304841         CDS       T04658                                  Symbol hmgb1a Name (RefSeq) high mobility group protein B1a   KO K10802   high mobility group protein B1 Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu03410   Base excision repair ipu04140   Autophagy - animal ipu04217   Necroptosis Brite KEGG Orthology (KO) [BR:ipu00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     100304841 (hmgb1a)  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     100304841 (hmgb1a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:ipu03036]     100304841 (hmgb1a)    03400 DNA repair and recombination proteins [BR:ipu03400]     100304841 (hmgb1a)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ipu04147]     100304841 (hmgb1a) Chromosome and associated proteins [BR:ipu03036]  Eukaryotic type   Nucleosome assembly factors    HMG (high mobility group) proteins     100304841 (hmgb1a) DNA repair and recombination proteins [BR:ipu03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Other BER factors      100304841 (hmgb1a)    MMR (mismatch excision repair)     Other MMR factors      100304841 (hmgb1a) Exosome [BR:ipu04147]  Exosomal proteins   Exosomal proteins of colorectal cancer cells    100304841 (hmgb1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HMG_box_2 HMG_box HMG_WDHD1 HMG_box_5 Ets NOA36 Motif Other DBs NCBI-GeneID:  100304841 NCBI-ProteinID:  XP_017344145 Ensembl:  ENSIPUG00000018990 UniProt:  A0A2D0SPD5 LinkDB All DBs Position 16:complement(9500326..9504037) Genome browser AA seq 202 aa AA seqDB search MGKDPAKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSEFSKKCSERWKTMSAKEKGKFE DMARLDKARYEREMKNYVPPRGEKKKRFKDPNAPKRPPSAFFIFCAEYRPKVKEETPGLS IGDVAKKLGEMWNKTSAEEKQPYEKKAAKLKEKYEKDIAAYRKGKVVGGAAKAPTKPDKA DEDEDEDDDDEDDDDDDDEDDE NT seq 609 nt NT seq  +upstreamnt  +downstreamnt atggggaaagacccagcaaaaccaagaggcaaaatgtcctcttatgcctattttgtacag acctgtagagaggaacataagaagaaacaccctgacacatcagtcaacttctcagagttc tctaaaaagtgctctgagcggtggaagactatgtcagccaaggaaaagggcaagtttgaa gatatggccagacttgacaaggcacgttatgagagagagatgaagaactatgttcctccc agaggtgaaaaaaagaagaggtttaaggaccccaatgctcccaagagacccccgtcagcc tttttcattttctgtgcggaatatcggcccaaggtgaaagaggagaccccaggtctgtct attggagatgtggccaagaagcttggagaaatgtggaacaagacctctgctgaagagaag cagccttatgagaagaaggcagccaagctgaaggagaaatatgagaaggacattgcggca tatcgaaagggaaaagttgtagggggtgctgccaaagcccccaccaagccagacaaagcc gatgaggatgaggatgaagatgatgatgatgaagatgatgatgatgatgatgatgaggat gatgagtaa

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