KEGG   Ictalurus punctatus (channel catfish): 100305039
Entry
100305039         CDS       T04658                                 
Symbol
gtf3ab
Name
(RefSeq) transcription factor IIIA
  KO
K09191  general transcription factor IIIA
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ipu03000]
    100305039 (gtf3ab)
   03021 Transcription machinery [BR:ipu03021]
    100305039 (gtf3ab)
Transcription factors [BR:ipu03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    100305039 (gtf3ab)
Transcription machinery [BR:ipu03021]
 Eukaryotic type
  RNA polymerase III system
   Basal transcription factors
    TFIIIA
     100305039 (gtf3ab)
SSDB
Motif
Pfam: zf-C2H2 zf-H2C2_2 zf-C2H2_4 GSCFA zf_Hakai Zap1_zf1 zf-AN1 Transglut_C PHD zf-C2H2_11
Other DBs
NCBI-GeneID: 100305039
NCBI-ProteinID: NP_001187205
Ensembl: ENSIPUG00000010714
UniProt: P79797
LinkDB
Position
23:5104151..5106893
AA seq 322 aa
MGERFKDPAKNFVCSFLNCKASFSKAWKLEAHYCKHTGLRPFACDRCDKTFCTRCQLTRH
NLSHSGKKPYQCLEDGCSESFISTAGLKNHVERVHQHKEKHYVCDYEGCAKEFRKKKQLR
SHKCEHMNQLPFECQYEGCGKKYTTSKKLQKHEKVHDVYPCAEEGCDFQGRMWTEYQAHR
KAAHREALQCDSCAKVFHKAWFLKKHKLFVHLGVRRVFKCTKEGCQKTYTTHFNLQNHIL
SFHEGIRSFICPHDGCGKAFAMEGSLKRHAVVHDPQKKKLQKKTKRGRKKKLEPKTNVSD
DSELPAQLHGLSLNTSTSQNNP
NT seq 969 nt   +upstreamnt  +downstreamnt
atgggagaacgtttcaaagatccggctaagaatttcgtgtgttcgtttctgaattgtaaa
gcttcattttccaaggcatggaagctggaagctcattactgcaaacacactgggctgaga
ccttttgcatgtgatcgctgtgataaaactttttgcacccgctgccagctcaccaggcac
aatctgagccacagtgggaagaaaccataccaatgtttagaggatggatgttcagagagc
tttatcagtacagcagggttaaagaaccatgttgaacgtgtgcaccagcacaaggagaag
cactatgtgtgtgactatgagggttgtgcgaaagagtttcgtaagaagaagcaactgagg
tctcacaaatgtgagcacatgaaccaactaccatttgagtgtcagtatgagggctgtggg
aagaagtataccacctctaaaaagctgcaaaaacatgagaaagtgcatgatgtttatccg
tgtgctgaagagggctgtgacttccagggaagaatgtggacggagtatcaggcacacagg
aaagcagcacacagagaggctctgcagtgcgacagctgtgcgaaggttttccataaagcc
tggtttctaaagaagcacaaactcttcgtgcacttgggcgtccggcgtgtgtttaagtgc
accaaggagggctgtcagaaaacctacaccacacatttcaacctccagaatcacattctt
tccttccacgagggcatacgctccttcatttgccctcatgatggttgtgggaaagcgttc
gccatggagggaagtctgaagcgacatgctgtagtccatgaccctcagaagaaaaagctg
cagaagaagaccaaacgaggacggaagaagaaacttgaaccaaagacgaatgtttcggat
gactctgagctgcctgcacaactgcacgggctgtctctaaacacatccacgtcccagaac
aacccatga

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