Ictalurus punctatus (channel catfish): 100305039
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Entry
100305039 CDS
T04658
Symbol
gtf3ab
Name
(RefSeq) transcription factor IIIA
KO
K09191
general transcription factor IIIA
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
100305039 (gtf3ab)
03021 Transcription machinery [BR:
ipu03021
]
100305039 (gtf3ab)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100305039 (gtf3ab)
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
100305039 (gtf3ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
GSCFA
zf_Hakai
Zap1_zf1
zf-AN1
Transglut_C
PHD
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
100305039
NCBI-ProteinID:
NP_001187205
Ensembl:
ENSIPUG00000010714
UniProt:
P79797
LinkDB
All DBs
Position
23:5104151..5106893
Genome browser
AA seq
322 aa
AA seq
DB search
MGERFKDPAKNFVCSFLNCKASFSKAWKLEAHYCKHTGLRPFACDRCDKTFCTRCQLTRH
NLSHSGKKPYQCLEDGCSESFISTAGLKNHVERVHQHKEKHYVCDYEGCAKEFRKKKQLR
SHKCEHMNQLPFECQYEGCGKKYTTSKKLQKHEKVHDVYPCAEEGCDFQGRMWTEYQAHR
KAAHREALQCDSCAKVFHKAWFLKKHKLFVHLGVRRVFKCTKEGCQKTYTTHFNLQNHIL
SFHEGIRSFICPHDGCGKAFAMEGSLKRHAVVHDPQKKKLQKKTKRGRKKKLEPKTNVSD
DSELPAQLHGLSLNTSTSQNNP
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgggagaacgtttcaaagatccggctaagaatttcgtgtgttcgtttctgaattgtaaa
gcttcattttccaaggcatggaagctggaagctcattactgcaaacacactgggctgaga
ccttttgcatgtgatcgctgtgataaaactttttgcacccgctgccagctcaccaggcac
aatctgagccacagtgggaagaaaccataccaatgtttagaggatggatgttcagagagc
tttatcagtacagcagggttaaagaaccatgttgaacgtgtgcaccagcacaaggagaag
cactatgtgtgtgactatgagggttgtgcgaaagagtttcgtaagaagaagcaactgagg
tctcacaaatgtgagcacatgaaccaactaccatttgagtgtcagtatgagggctgtggg
aagaagtataccacctctaaaaagctgcaaaaacatgagaaagtgcatgatgtttatccg
tgtgctgaagagggctgtgacttccagggaagaatgtggacggagtatcaggcacacagg
aaagcagcacacagagaggctctgcagtgcgacagctgtgcgaaggttttccataaagcc
tggtttctaaagaagcacaaactcttcgtgcacttgggcgtccggcgtgtgtttaagtgc
accaaggagggctgtcagaaaacctacaccacacatttcaacctccagaatcacattctt
tccttccacgagggcatacgctccttcatttgccctcatgatggttgtgggaaagcgttc
gccatggagggaagtctgaagcgacatgctgtagtccatgaccctcagaagaaaaagctg
cagaagaagaccaaacgaggacggaagaagaaacttgaaccaaagacgaatgtttcggat
gactctgagctgcctgcacaactgcacgggctgtctctaaacacatccacgtcccagaac
aacccatga
DBGET
integrated database retrieval system