Ictalurus punctatus (channel catfish): 100305041
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Entry
100305041 CDS
T04658
Symbol
myd88
Name
(RefSeq) myeloid differentiation primary response protein MyD88
KO
K04729
myeloid differentiation primary response protein MyD88
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04620
Toll-like receptor signaling pathway
ipu04621
NOD-like receptor signaling pathway
ipu05132
Salmonella infection
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100305041 (myd88)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100305041 (myd88)
04621 NOD-like receptor signaling pathway
100305041 (myd88)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100305041 (myd88)
09171 Infectious disease: bacterial
05132 Salmonella infection
100305041 (myd88)
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Paralog
GFIT
Motif
Pfam:
Death
TIR_2
TIR
DUF3016
Motif
Other DBs
NCBI-GeneID:
100305041
NCBI-ProteinID:
NP_001187207
Ensembl:
ENSIPUG00000012161
UniProt:
B3GN17
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All DBs
Position
23:5720002..5725383
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AA seq
279 aa
AA seq
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MSESSSSCIDYESIPAIALNYSVRKRLALYLNPSNTVAADWTEIAEKMEFTYLEIKNYEK
RENPTRKLLEEWQTRAGATVGKLLSFLEQAERKDIILDLQQLIDDDCRKYLERQKELPVQ
VPEVDSGHQDRGITVNDGHVPEMFDAFICYCQNDFQFVHEMIRQLEQTDYNLKLCVFDRD
VLPGTCVWTITSELIEIRCKRMVVVISDDYLDSDACDFQTKFALSLCPGARTKRLIPVVY
KPMKKPFPSILRFLTVCDYTRPCTQSWFWVRLAKALSLP
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagagttcatcttcatgcattgactatgagtcgattccagccatcgctctgaac
tacagcgtgagaaaaagactggctttgtatttaaacccctcgaacacggtggcagcagac
tggaccgaaatcgccgagaaaatggagttcacctacctggagattaaaaactacgagaag
agagagaaccccacccggaagctgctggaggaatggcagacccgagctggggccacggtg
ggcaaactgctgtccttcctggagcaggcagagaggaaagacatcatcttagacctgcag
caacttatagatgacgactgcaggaagtatttagagaggcaaaaggagcttcctgttcag
gtgcccgaggtggacagcgggcaccaggatcgaggcatcactgtaaatgatggtcacgtg
ccggagatgttcgacgctttcatttgctactgtcagaacgacttccagtttgtccatgag
atgatcagacagctggagcagaccgactacaacctgaagctgtgcgtgtttgaccgtgac
gtcctgcccgggacgtgtgtgtggaccatcaccagcgagctcatcgagataaggtgcaag
aggatggtggtcgtcatttctgatgattacctggacagcgatgcttgtgacttccagact
aaattcgccctcagtctttgcccaggggctcggaccaaacggctgattcctgtggtctac
aagcccatgaagaagccctttcccagcattctgcgtttcctgaccgtgtgtgactacacc
aggccgtgtacacagtcctggttctgggttcgactggccaaagccctttcccttccctga
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