Ictalurus punctatus (channel catfish): 100305044
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Entry
100305044 CDS
T04658
Name
(RefSeq) luteinizing hormone receptor precursor
KO
K04248
lutropin-choriogonadotropic hormone receptor
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04020
Calcium signaling pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
100305044
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100305044
04081 Hormone signaling
100305044
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ipu04030
]
100305044
G protein-coupled receptors [BR:
ipu04030
]
Rhodopsin family
Peptide
Lutropin-choriogonadotropic hormone
100305044
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
Motif
Other DBs
NCBI-GeneID:
100305044
NCBI-ProteinID:
NP_001187208
Ensembl:
ENSIPUG00000015402
UniProt:
Q98T85
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All DBs
Position
29:complement(13996426..14013779)
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AA seq
696 aa
AA seq
DB search
MVSRCSVAALLLAVVMRLSRGGAFTCPPICSCTADTLSCTAQTERRTRVPSSTTSTNLRL
AHLPLKEVQSGTFRGLINVSRIEISQSDSIRKIKGEAFLSIHNVIEISILNIIHLSAMEK
GAFTDLPRLRYLSICNTGIRHFPDFSRISSLGLEFFLDMGDNIQLNNIPANAFQGISKAD
MYMNLVRNGFTQIESHAFNGTRLEKLIMKDNWHLIKIHDDAFEGAEGPTLLDVSSTALKS
LPTRGLRGVKVLIARSTPSLKTLPPLDNLAELQEADLTYPSHCCAFHTWKRNNRETAVFD
RFKNLTMLCNMDDQANNMDPSGDDLNDINFHYPDLELCASSSSFKCTPEPDAFNPCEDLL
GHTFLRAITWIVTVFALVGNLAVLLVLLLSHQKLSVSRFLMCNLAFADLCMGFYLLLIAV
ADYRSRQEYYNHATDWQTGMGCGVAGFLTVFASELSIYTLTMITLERWHTITHAMQMSRR
LRLRHMVTMMAIGWGFSFVIALLPVVGVSSYSKVSICLPMDIETPVSQGYVVAVLVINVA
AFLMVCSSYAGIYLSVRNPNVPTRHGHTRMAKRMAVLIFTDFLCMAPISFFAISAALHMP
LISVSQSKILLILFYPINSLCNPFLYTIFTRAFRRDMCLLLSRCGCCHAQAEFYRSQGLL
GFTLAPRKKRVRKPHSKNFRAYHVKLQGCIFNKAAT
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcacggtgctcggtggcggcgctgctgctggcggtggtgatgcgtctgagccgc
gggggggcgttcacctgcccgccgatctgcagctgcaccgcggacacactgagctgcacc
gcgcaaaccgagaggagaacccgggtaccatcctccaccactagcaccaacctaagatta
gcgcacctgcctttgaaagaagtgcaaagtggaacatttcgaggtctcatcaacgtgtcc
agaattgaaatttctcaaagtgactccatcagaaaaataaaaggcgaggcatttctctcg
atccacaacgttatcgaaatctcaattctgaacatcattcacctgtcagctatggaaaag
ggtgcattcacagatctgccaagactgagatacctgagcatctgcaacacgggaataagg
catttcccagatttttctcgcatctcctcactggggctggaattcttcctggacatggga
gacaacattcagctgaataacatcccagccaacgcgtttcaaggcatatccaaggcggac
atgtacatgaatctggtcagaaatggatttacccagatcgaatctcacgccttcaacggg
accagactggaaaagttgattatgaaagacaactggcacctcattaaaatccatgatgat
gcttttgagggagctgaaggaccaacgttgttggatgtatcatccaccgctctaaaatcg
ctccctacacgaggactgagaggggtgaaggttctcatagcgcgctctacaccttcccta
aagaccctccctccacttgataacctcgcagagcttcaggaggccgacctcacctaccca
agccactgctgcgccttccacacctggaaacgcaacaacagggagaccgctgtatttgac
cgctttaagaacctgaccatgctgtgcaacatggatgaccaagcaaataacatggaccca
tcaggtgacgatcttaacgacatcaatttccactaccccgatctggagttgtgcgccagc
agtagctccttcaagtgcaccccggaaccggacgccttcaacccttgcgaggacttgctg
ggtcataccttcctgcgtgccatcacttggattgtcactgttttcgctctcgtgggaaac
ctggcagtgctgctcgttctactcctgagccaccagaagctgagcgtctcccggttcctc
atgtgcaacttggccttcgcggatctgtgcatgggcttctatttgctgcttatcgccgtg
gcggactatcgctcgcgtcaagagtactacaaccacgctacggactggcagactggcatg
ggatgtggggtagctgggttcttgaccgtcttcgcaagcgaactgtcgatctatactctc
accatgattaccctagagcgctggcacaccatcactcatgccatgcagatgagcaggaga
ctgaggcttcgccacatggtcaccatgatggcgattggttggggattttcctttgtaatc
gctctgcttcctgtagttggcgtcagcagctactcgaaggtgagcatctgccttccgatg
gacattgaaactccggtttcgcagggttacgtggtggctgtgttggtcataaacgtggca
gcctttttaatggtctgttccagctacgccgggatatacctaagcgtgcgcaacccgaac
gtaccgacacgtcacggacacacgaggatggccaaacgaatggcggtgctcatctttacg
gacttcctgtgcatggcacccatctcgttcttcgccatttccgccgctttgcacatgcct
ctcatttcggtctcccaatccaaaatcctgctcatccttttctacccaatcaactcgctg
tgcaacccgtttctgtacaccatattcacacgagccttccgcagggacatgtgtctgctt
ttaagccgatgcggttgctgccacgctcaagcggagttctacagatcgcagggtctcttg
gggttcaccttggctcccaggaagaagagagtgaggaaacctcactcgaaaaatttccga
gcgtaccacgtcaagctgcagggatgcatcttcaataaagctgcaacatga
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