Ictalurus punctatus (channel catfish): 100335022
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Entry
100335022 CDS
T04658
Name
(RefSeq) growth hormone secretagog receptor 1a
KO
K04284
growth hormone secretagogue receptor
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100335022
04081 Hormone signaling
100335022
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ipu04030
]
100335022
G protein-coupled receptors [BR:
ipu04030
]
Rhodopsin family
Peptide
Ghrelin
100335022
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Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
7tm_4
Y3IP1_CEST_C
DUF8676
Epiregulin_C
Motif
Other DBs
NCBI-GeneID:
100335022
NCBI-ProteinID:
NP_001187250
UniProt:
A0A2D0PFQ5
C6GAB7
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All DBs
Position
17:complement(25439491..25441365)
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AA seq
310 aa
AA seq
DB search
MDVMWTNPSNCSSNCSWDANANVYTSLPPITIFPVPVLIGVTVTCVLFFLAGVAGNLTTI
MVVFKYKEMRTTTNLYLSSMAFSDLLIFLCLPLDLYRMWRYRPWTLGNALCKLFQFVSEC
CTYSTILNMTALSAERYFAICFPLRAKVTVTKRRVRGLILALWTVALCSAGPVFVLVGVE
HENGTDWRETSECKATEYGERTGLLSAMVWVSSGFFLLPVFCLTVLYGLIGRKLWRRKRR
RRDRMKSRDSSNRQTIKMLGECVARCGCYVYLCKNVCKCDARIKVSVRCKMRNDKAASNH
SFSTYILCAN
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgatgtggacgaacccgtctaactgttcgtcaaactgcagttgggatgctaac
gctaatgtttatacttcgttaccccccatcactattttccccgtcccggtcctcatcggt
gtaacggtcacctgtgtgctcttcttcctcgcgggagtggcgggaaatttgaccaccatc
atggtggtgttcaagtacaaagagatgcgcaccacaaccaacctgtacctgtccagcatg
gcattctcagacctgctgatcttcctgtgcctgccgttggacctgtaccggatgtggcgg
taccggccgtggacgttgggaaatgcactgtgcaaacttttccagtttgtgagtgagtgc
tgcacctactccaccatcttgaacatgacggcactgagtgcagagcgatacttcgccatc
tgcttcccgctcagggccaaagtcacagtgaccaagcgacgcgtgcgtgggctcatcctc
gcgctctggaccgtggccctgtgcagcgccggacccgtgttcgtgctggtgggtgtcgag
cacgagaacggcaccgactggcgcgagacgagcgagtgcaaggccacggagtacggtgaa
cgcacgggcctgctgagcgccatggtgtgggtctcgagcgggttcttcctgctgcccgtc
ttctgtctgaccgtgctgtacggactgatcggccggaaactctggaggaggaagaggagg
aggagggacaggatgaagagcagggacagcagcaacaggcagaccatcaagatgcttggt
gagtgtgtggcacgttgtggatgttatgtttatttgtgtaagaatgtgtgtaaatgtgat
gcacgtataaaagtgtccgtgaggtgtaaaatgcgtaatgacaaagcagcaagcaatcat
tcattttctacatacatactctgtgcaaattag
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