Ictalurus punctatus (channel catfish): 100526699
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Entry
100526699 CDS
T04658
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100526699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
100526699
03016 Transfer RNA biogenesis [BR:
ipu03016
]
100526699
03012 Translation factors [BR:
ipu03012
]
100526699
04131 Membrane trafficking [BR:
ipu04131
]
100526699
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
100526699
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
100526699
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
100526699
Translation factors [BR:
ipu03012
]
Eukaryotic type
Elongation factors
100526699
Membrane trafficking [BR:
ipu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
100526699
Exosome [BR:
ipu04147
]
Exosomal proteins
Proteins found in most exosomes
100526699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
100526699
NCBI-ProteinID:
XP_017309805
Ensembl:
ENSIPUG00000019880
UniProt:
A0A2D0PXG5
LinkDB
All DBs
Position
24:complement(9381320..9384589)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETSKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAGGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQARFEEITKEVSAYIKK
IGYNPAAVAFVPISGWHGDNMLEPSTNMGWFKGWKVERKEGNASGTTLLDALDAILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHESLP
EATPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPQEAGSFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKNLKSGDAAIVEMVPGKPMCVESFSTYPP
LGRFAVRDMRQTVAVGVIKSVEKKAAGAGKVTKSAQKAAKTK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagacccacattaacatcgtggttatcggccacgtcgactctggaaag
tcaaccaccaccggccatctgatctacaaatgcggaggtatcgacaagagaaccatcgag
aagttcgagaaggaagccgctgagatgggtaagggctccttcaagtacgcctgggtgctg
gacaaactgaaggctgagcgtgagcgtggtatcaccatcgacatcgccctctggaagttt
gagaccagcaagtactatatcaccatcatcgatgcccctggacacagagacttcatcaag
aacatgatcactggtacctcacaggctgattgtgctgtgctgatcgttgctggtggtgtg
ggtgagttcgaggctggtatctctaagaatggacagacccgtgagcatgccctcctggcc
ttcaccctgggagtgaagcagcttatcgttggagtcaacaagatggactccaccgagccc
ccatacagccaggctcgctttgaggagatcaccaaggaagtcagtgcttacatcaagaag
attggctacaaccctgctgccgttgctttcgtcccaatttctgggtggcatggagacaac
atgctggagcccagcacaaatatgggctggttcaagggatggaaggttgagcgtaaggag
ggaaatgccagtggcactacccttctggatgccctggatgccatcctgcccccttcccgc
cccaccgacaagcctctccgtctgcccctgcaggatgtctacaaaattggaggtattgga
actgtacccgtgggccgtgtggagactggtgttctcaagcctggcatggttgtgaccttt
gcccccgtcaatgtgaccactgaggttaagtctgttgaaatgcaccatgagtctctccct
gaagcaactcctggtgacaatgttggcttcaacgtgaagaatgtgtctgtgaaggacatc
cgtcgtggtaacgtggctggagacagcaagaacgacccaccccaggaggctggcagcttc
actgctcaggtcatcatcctgaaccaccccggtcagatctctcagggttatgctcctgtg
ctggactgccacactgctcacattgcttgcaagtttgctgagctcaaggagaagattgac
cgtcgttctggtaagaagcttgaggacaaccccaagaacctgaagtctggagatgcagcc
attgttgaaatggttcctggcaagcccatgtgtgtggagagcttctctacctatcctcct
cttggacgttttgctgtgcgtgacatgaggcagactgttgctgttggtgtcatcaagagt
gttgagaagaaggctgctggtgctggcaaggtcacgaagtctgcacagaaggctgccaag
accaagtga
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