Ictalurus punctatus (channel catfish): 100528116
Help
Entry
100528116 CDS
T04658
Symbol
atg3
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG3
KO
K08343
ubiquitin-like-conjugating enzyme ATG3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04136
Autophagy - other
ipu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100528116 (atg3)
04136 Autophagy - other
100528116 (atg3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
100528116 (atg3)
04121 Ubiquitin system [BR:
ipu04121
]
100528116 (atg3)
03029 Mitochondrial biogenesis [BR:
ipu03029
]
100528116 (atg3)
Membrane trafficking [BR:
ipu04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
100528116 (atg3)
Ubiquitin system [BR:
ipu04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
100528116 (atg3)
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100528116 (atg3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Med13_N
Motif
Other DBs
NCBI-GeneID:
100528116
NCBI-ProteinID:
NP_001187315
Ensembl:
ENSIPUG00000003956
UniProt:
E3TDU9
LinkDB
All DBs
Position
12:3866073..4595383
Genome browser
AA seq
313 aa
AA seq
DB search
MQDVFNSVKGTALGVAEFLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWASGEE
AKVKPYLPKDKQFLLTRNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNSVTGVAE
TVREISLDNKDNMNMNVHLGRGISDDDDDEVEAADMKEYEESGLLETDEATLDTSKMADT
AKWKAEAGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEERQPLTVDQMYEDISQDHV
KKTVTIENHPHLPPPAMCSVHPCRHAEVMKKIIETVAEGGGELGVHMYLLIFLKFVQAVI
PTIEYDYARHFTM
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgtcttcaattctgtgaaaggcacagctctaggagtggctgagtttctaacg
cccgtcctgaaggaatccaaatttaaagagactggagttataactcctgaggagtttgtt
gctgcaggagaccatctagttcatcactgccccacgtggaaatgggcatctggagaagaa
gcaaaggtgaagccgtacttgcccaaggacaagcagtttttgttaacccgtaatgttcca
tgttacaaacgttgtaaacaaatggagtactctgatgagctggaggctattatagaagag
gacgatggagatggaggatgggttgacacttatcataactctgtgaccggtgtggcggaa
acagttcgtgaaatctccttggataataaagataatatgaatatgaatgtgcacttgggc
agaggaattagtgatgatgacgatgatgaagtggaggcagcagatatgaaggagtatgaa
gaaagtggacttttggaaacagatgaggccactcttgacacaagtaaaatggcagataca
gctaaatggaaggctgaggcaggcggagaagatgccattcttcagacaagaacctatgat
ctatacataacttatgacaaatactatcaaactcctaggctgtggctttttggatatgat
gaggaaagacaacccctcactgttgatcagatgtatgaggatatcagccaggatcatgtg
aagaaaacagtcaccattgaaaaccacccccacctgcctcctcctgctatgtgctctgtg
cacccatgcaggcatgccgaagtgatgaagaagatcattgaaactgtggctgaaggtgga
ggagagcttggggttcatatgtacctcttgattttcctgaaatttgtgcaagctgttatt
ccaacaatagaatatgattacgcgagacacttcactatgtaa
DBGET
integrated database retrieval system
