KEGG   Ictalurus punctatus (channel catfish): 100528117
Entry
100528117         CDS       T04658                                 
Symbol
ccnh
Name
(RefSeq) cyclin-H
  KO
K06634  cyclin H
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03022  Basal transcription factors
ipu03420  Nucleotide excision repair
ipu04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100528117 (ccnh)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100528117 (ccnh)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ipu03021]
    100528117 (ccnh)
   03400 DNA repair and recombination proteins [BR:ipu03400]
    100528117 (ccnh)
Transcription machinery [BR:ipu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     100528117 (ccnh)
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     100528117 (ccnh)
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N
Other DBs
NCBI-GeneID: 100528117
NCBI-ProteinID: NP_001187316
Ensembl: ENSIPUG00000013612
UniProt: E3TDV0
LinkDB
Position
22:10687518..10699440
AA seq 321 aa
MYHNSSQKKYWTFNKEANLENLRLEANQKFRAKALSLRKPGISESMFLDPHEEKVLFRHY
EKRLLDFCTVFKPAMPKSVVGTACMYFRRFYLNNSLMEYHPRTIMLTCAYLSCKVDEFNV
SSTQFVENLQENPAAQERALEQILEYELLLIQQLNFHLVIHNPYRPLEGFLIDLKTRYPL
LENPEMLRKSAEDFLNRAAMTDAGLLFSPSQIALTAVLNSAARAGLNMETYLTECMGLKD
EKETLSKMYDSMRRITTLLKEYELPKSNEVNICKQKLERIHTEFNSNTSLKRKHGYEDDD
HVVKKPLVTEEEWTDEGLDLL
NT seq 966 nt   +upstreamnt  +downstreamnt
atgtaccacaacagctcccagaagaaatactggactttcaataaagaggccaacttggaa
aatttaagacttgaggctaatcagaagtttcgtgcgaaagccctaagtctccgaaagcct
ggaataagcgagtccatgtttcttgatccccatgaagagaaagtgctctttagacactat
gagaagagattgcttgacttctgcacagtgttcaaacctgcaatgcccaaatctgtagtg
ggcacggcttgtatgtatttccgaagattttatttaaacaactcattaatggagtaccac
ccaaggacaataatgttgacgtgtgcgtacctgtcctgtaaggtggacgaatttaacgtc
tccagcactcagtttgtggagaatcttcaggaaaatccagcagcacaggagagggctctg
gagcagatcctggagtacgagctgctcctcatccagcagctgaactttcacctggtgata
cacaacccgtatcggccactcgaaggctttctcatagacctgaagacaaggtatccactg
ttggagaatccagagatgttgagaaaaagtgcagaagacttcctgaacagagcagcaatg
acggacgcaggccttttgttctctccgtcccagattgccctcaccgccgtccttaacagt
gcagcacgagcaggcctcaacatggagacgtatcttactgaatgcatggggttaaaagat
gaaaaggagacactttccaagatgtacgattcgatgaggcgaatcactactctcctcaaa
gaatatgagcttcccaaatccaacgaagtgaacatttgcaaacagaaactggaaaggatc
cacaccgagttcaacagcaacacaagtttgaaaaggaagcatggctatgaagatgatgac
cacgtggtgaaaaagcctcttgttactgaagaggagtggacagatgaaggcctggatctt
ttgtag

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