Ictalurus punctatus (channel catfish): 100528117
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Entry
100528117 CDS
T04658
Symbol
ccnh
Name
(RefSeq) cyclin-H
KO
K06634
cyclin H
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03022
Basal transcription factors
ipu03420
Nucleotide excision repair
ipu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100528117 (ccnh)
09124 Replication and repair
03420 Nucleotide excision repair
100528117 (ccnh)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
100528117 (ccnh)
03400 DNA repair and recombination proteins [BR:
ipu03400
]
100528117 (ccnh)
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100528117 (ccnh)
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100528117 (ccnh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
Motif
Other DBs
NCBI-GeneID:
100528117
NCBI-ProteinID:
NP_001187316
Ensembl:
ENSIPUG00000013612
UniProt:
E3TDV0
LinkDB
All DBs
Position
22:10687518..10699440
Genome browser
AA seq
321 aa
AA seq
DB search
MYHNSSQKKYWTFNKEANLENLRLEANQKFRAKALSLRKPGISESMFLDPHEEKVLFRHY
EKRLLDFCTVFKPAMPKSVVGTACMYFRRFYLNNSLMEYHPRTIMLTCAYLSCKVDEFNV
SSTQFVENLQENPAAQERALEQILEYELLLIQQLNFHLVIHNPYRPLEGFLIDLKTRYPL
LENPEMLRKSAEDFLNRAAMTDAGLLFSPSQIALTAVLNSAARAGLNMETYLTECMGLKD
EKETLSKMYDSMRRITTLLKEYELPKSNEVNICKQKLERIHTEFNSNTSLKRKHGYEDDD
HVVKKPLVTEEEWTDEGLDLL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtaccacaacagctcccagaagaaatactggactttcaataaagaggccaacttggaa
aatttaagacttgaggctaatcagaagtttcgtgcgaaagccctaagtctccgaaagcct
ggaataagcgagtccatgtttcttgatccccatgaagagaaagtgctctttagacactat
gagaagagattgcttgacttctgcacagtgttcaaacctgcaatgcccaaatctgtagtg
ggcacggcttgtatgtatttccgaagattttatttaaacaactcattaatggagtaccac
ccaaggacaataatgttgacgtgtgcgtacctgtcctgtaaggtggacgaatttaacgtc
tccagcactcagtttgtggagaatcttcaggaaaatccagcagcacaggagagggctctg
gagcagatcctggagtacgagctgctcctcatccagcagctgaactttcacctggtgata
cacaacccgtatcggccactcgaaggctttctcatagacctgaagacaaggtatccactg
ttggagaatccagagatgttgagaaaaagtgcagaagacttcctgaacagagcagcaatg
acggacgcaggccttttgttctctccgtcccagattgccctcaccgccgtccttaacagt
gcagcacgagcaggcctcaacatggagacgtatcttactgaatgcatggggttaaaagat
gaaaaggagacactttccaagatgtacgattcgatgaggcgaatcactactctcctcaaa
gaatatgagcttcccaaatccaacgaagtgaacatttgcaaacagaaactggaaaggatc
cacaccgagttcaacagcaacacaagtttgaaaaggaagcatggctatgaagatgatgac
cacgtggtgaaaaagcctcttgttactgaagaggagtggacagatgaaggcctggatctt
ttgtag
DBGET
integrated database retrieval system