Ictalurus punctatus (channel catfish): 100528172
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Entry
100528172 CDS
T04658
Symbol
wdr77
Name
(RefSeq) methylosome protein 50
KO
K13221
methylosome protein 50
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
100528172 (wdr77)
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100528172 (wdr77)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
EIF3I
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_RIG_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_NWD2_C
Beta-prop_NOL10_N
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
Beta-prop_LRRK2
Beta-prop_VPS8
OSK
Motif
Other DBs
NCBI-GeneID:
100528172
NCBI-ProteinID:
NP_001187371
Ensembl:
ENSIPUG00000017106
UniProt:
E3TE22
LinkDB
All DBs
Position
21:21413240..21416272
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AA seq
322 aa
AA seq
DB search
MLQEPRWRIPPNAPACMERHLECARYRGDGVFLLSASSLTGRCWFGSIWIYSDAKLAPNE
GFCKAGLQTEAGLNDVKWLTDRTIVTGTDSGAVELWDLAEDERLLVNRFSRHEHDHIVTT
ISPAADAHHAVTGSMDCRVKVWDLKQESVINTYNVHSMAVSCVSCSPTDQSLFLSCAQDG
RLLLWDRRKPKPASRLDVVSPSCSVTAVVWHPNQTTTIAYGDELGRVTVTDFQAAGHTQT
MNTHTRKVSELAFSSHSSPNLASVSDDCTVAVVNTELREIYRDRRHQDFVRGVCWVPGGS
DELTTAGWDHQVLHHNVQETRT
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaggagccccggtggcggattccccccaatgctcccgcgtgcatggagagacac
ctggagtgcgcgcgctaccgcggagacggtgtgttcctgctcagtgcctccagtttgacg
ggtcggtgttggttcggttctatttggatttattctgatgctaaactggcgcccaatgag
ggcttctgtaaggcggggcttcagacagaggcggggcttaatgatgtcaagtggctgacg
gacaggaccatagtcacaggaaccgattctggtgcagtggaattatgggatttggctgaa
gatgagcgcttgttggtgaacaggttcagtcgtcatgaacatgatcacatcgtcaccaca
atcagtccagcagctgacgcccaccacgctgtcactggcagcatggactgcagggttaaa
gtgtgggatctgaaacaggagtctgtgatcaacacctacaatgtgcactccatggcagtg
agttgtgtgtcctgcagcccgactgaccaatcactgttcctgtcctgtgctcaggacggc
cgattgttgctgtgggatcgtagaaaacccaaacctgcctctcgcttagatgtggtttcc
ccaagctgttctgtgactgctgtcgtgtggcatccaaatcagaccaccaccatcgcctac
ggtgatgagttgggcagggtaactgtgacagatttccaggctgcaggacacacacagacg
atgaacacacacacgcgcaaagtgtcagagctcgccttctcctcacacagttctcctaac
cttgcctcagtgagtgatgactgcactgtcgccgtggtgaacacagagctcagagaaatt
tacagagaccgtagacaccaggactttgtgcgtggtgtgtgttgggttccaggtggctcc
gatgagctgaccactgcagggtgggatcaccaggtgctccatcataatgtgcaggagaca
cgcacttaa
DBGET
integrated database retrieval system