KEGG   Ictalurus punctatus (channel catfish): 100528192
Entry
100528192         CDS       T04658                                 
Symbol
thoc7
Name
(RefSeq) THO complex subunit 7 homolog
  KO
K13176  THO complex subunit 7
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03013  Nucleocytoplasmic transport
ipu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100528192 (thoc7)
  09122 Translation
   03013 Nucleocytoplasmic transport
    100528192 (thoc7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ipu03019]
    100528192 (thoc7)
   03041 Spliceosome [BR:ipu03041]
    100528192 (thoc7)
Messenger RNA biogenesis [BR:ipu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100528192 (thoc7)
Spliceosome [BR:ipu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100528192 (thoc7)
SSDB
Motif
Pfam: THOC7 COG6_N OVT1 PMEI DASH_Dad2 V_ATPase_I Prominin CENPH DUF4407 Peptidase_S10
Other DBs
NCBI-GeneID: 100528192
NCBI-ProteinID: NP_001187391
Ensembl: ENSIPUG00000023494
UniProt: E3TE40
LinkDB
Position
21:complement(17462841..17467380)
AA seq 203 aa
MGTITDDEVIRKRLLIDGDGAGDDRRINVLLKSFLKWCHSNVTPEEGFAQYQRMLGSLSQ
CEFSMGKTLLVYDMNLKEMENYETIYADIEQSISAAHEKIGECKKEIQRAKRIRKNRQEY
DALAKVIQQHPDRHKTMEQLEALDKELQQLSQIKENVEDKLELRKKQFHVLLSTIQELQQ
TLDNDEKMESDETSQESPMENGD
NT seq 612 nt   +upstreamnt  +downstreamnt
atgggcaccataactgatgatgaggtcatccgtaagcggctgctcatcgacggcgacgga
gctggagacgaccgacgcatcaacgtcctcctgaaaagcttcctgaaatggtgccactcg
aacgtgacaccagaagaagggttcgctcagtaccagaggatgctcggaagcttgtcgcag
tgcgagttctcgatgggaaagacacttttggtgtatgacatgaacctgaaggagatggag
aactatgaaacgatctacgcagacatcgagcaaagtatatcagccgcacacgagaaaatc
ggcgagtgcaaaaaagagatccagagagcaaagcggatacgaaagaaccgccaagagtat
gatgctttggcaaaagtcatccagcaacatccagacagacacaaaacaatggagcagctt
gaagcgctggacaaagaacttcaacagctttcccaaatcaaagagaatgtagaagataag
ttggagctgcgtaagaaacagttccacgtgcttctcagtaccatccaggagcttcagcag
acgctagacaatgatgaaaagatggagagtgatgaaacgtcccaagaaagtccaatggag
aatggagattag

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