Ictalurus punctatus (channel catfish): 100528192
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Entry
100528192 CDS
T04658
Symbol
thoc7
Name
(RefSeq) THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03013
Nucleocytoplasmic transport
ipu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100528192 (thoc7)
09122 Translation
03013 Nucleocytoplasmic transport
100528192 (thoc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
100528192 (thoc7)
03041 Spliceosome [BR:
ipu03041
]
100528192 (thoc7)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100528192 (thoc7)
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100528192 (thoc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
COG6_N
OVT1
PMEI
DASH_Dad2
V_ATPase_I
Prominin
CENPH
DUF4407
Peptidase_S10
Motif
Other DBs
NCBI-GeneID:
100528192
NCBI-ProteinID:
NP_001187391
Ensembl:
ENSIPUG00000023494
UniProt:
E3TE40
LinkDB
All DBs
Position
21:complement(17462841..17467380)
Genome browser
AA seq
203 aa
AA seq
DB search
MGTITDDEVIRKRLLIDGDGAGDDRRINVLLKSFLKWCHSNVTPEEGFAQYQRMLGSLSQ
CEFSMGKTLLVYDMNLKEMENYETIYADIEQSISAAHEKIGECKKEIQRAKRIRKNRQEY
DALAKVIQQHPDRHKTMEQLEALDKELQQLSQIKENVEDKLELRKKQFHVLLSTIQELQQ
TLDNDEKMESDETSQESPMENGD
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccataactgatgatgaggtcatccgtaagcggctgctcatcgacggcgacgga
gctggagacgaccgacgcatcaacgtcctcctgaaaagcttcctgaaatggtgccactcg
aacgtgacaccagaagaagggttcgctcagtaccagaggatgctcggaagcttgtcgcag
tgcgagttctcgatgggaaagacacttttggtgtatgacatgaacctgaaggagatggag
aactatgaaacgatctacgcagacatcgagcaaagtatatcagccgcacacgagaaaatc
ggcgagtgcaaaaaagagatccagagagcaaagcggatacgaaagaaccgccaagagtat
gatgctttggcaaaagtcatccagcaacatccagacagacacaaaacaatggagcagctt
gaagcgctggacaaagaacttcaacagctttcccaaatcaaagagaatgtagaagataag
ttggagctgcgtaagaaacagttccacgtgcttctcagtaccatccaggagcttcagcag
acgctagacaatgatgaaaagatggagagtgatgaaacgtcccaagaaagtccaatggag
aatggagattag
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integrated database retrieval system