Ictalurus punctatus (channel catfish): 100528244
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Entry
100528244 CDS
T04658
Symbol
nsmce2
Name
(RefSeq) E3 SUMO-protein ligase NSE2
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
100528244 (nsmce2)
03400 DNA repair and recombination proteins [BR:
ipu03400
]
100528244 (nsmce2)
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
100528244 (nsmce2)
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
100528244 (nsmce2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Nse
zf-MIZ
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
100528244
NCBI-ProteinID:
NP_001187443
Ensembl:
ENSIPUG00000001953
UniProt:
E3TEB1
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All DBs
Position
1:complement(6319986..6334232)
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AA seq
231 aa
AA seq
DB search
MSLNTIQPQLSSLKTCQTDISTGMDIVSEVALDLVEAQATDDSPGLKKLDQMMLECAKLD
REINCFVESVEQMVAQVRHEPPDAMFKLKDSVKERFAERTAAVSDADVEKHSKVVAFRDS
IRKSLQQVNQMAGGSVEEELDEDIAVTQSQTNFTCPLTQVEMVNPMKNKKCQHCYDQEAI
LSVIKMKHTNKKKCRCPVVGCGNTDVKESDLESDPVMRRMIQNYKRQSGKS
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgaacaccattcagccccagctgtcctctctgaagacatgtcagacggacatc
agcacagggatggacattgtgtcagaagtcgctctggatctggtcgaagctcaagctaca
gatgacagtccaggtctgaagaaactggatcagatgatgttggaatgtgccaaactggac
agagagatcaactgctttgtggaatctgtcgagcagatggttgctcaggtgagacacgag
cctccagacgccatgttcaagctgaaagactcagtaaaggagcgatttgctgaacgaacg
gctgcggtctccgatgctgacgttgaaaaacacagtaaagtggtagccttccgagacagc
atcaggaaatctctgcagcaagtaaatcagatggcaggaggaagtgtagaagaggagctg
gatgaagacattgctgtaacacagagccagacgaacttcacatgtcctcttacccaggtt
gaaatggtcaatccaatgaaaaacaagaagtgccagcattgctacgatcaggaggccatt
ctgtccgtcattaagatgaagcataccaataagaagaaatgtcgctgtcccgtggtcggc
tgtggaaacacggacgtcaaggaatcagatctggaatcagacccggttatgaggagaatg
atacagaactataagagacagagtggaaagagctga
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