Ictalurus punctatus (channel catfish): 100528297
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Entry
100528297 CDS
T04658
Symbol
rab5ab
Name
(RefSeq) RAB5A, member RAS oncogene family, b
KO
K07887
Ras-related protein Rab-5A
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04137
Mitophagy - animal
ipu04144
Endocytosis
ipu04145
Phagosome
ipu04148
Efferocytosis
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100528297 (rab5ab)
04145 Phagosome
100528297 (rab5ab)
04137 Mitophagy - animal
100528297 (rab5ab)
04148 Efferocytosis
100528297 (rab5ab)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100528297 (rab5ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
100528297 (rab5ab)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
100528297 (rab5ab)
04031 GTP-binding proteins [BR:
ipu04031
]
100528297 (rab5ab)
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
100528297 (rab5ab)
Endosome - Lysosome transport
100528297 (rab5ab)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100528297 (rab5ab)
Exosomal proteins of other body fluids (saliva and urine)
100528297 (rab5ab)
Exosomal proteins of colorectal cancer cells
100528297 (rab5ab)
Exosomal proteins of bladder cancer cells
100528297 (rab5ab)
GTP-binding proteins [BR:
ipu04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
100528297 (rab5ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
GTP_EFTU
MMR_HSR1
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
100528297
NCBI-ProteinID:
NP_001187496
Ensembl:
ENSIPUG00000023392
UniProt:
E3TEI0
LinkDB
All DBs
Position
23:complement(17517586..17527849)
Genome browser
AA seq
217 aa
AA seq
DB search
MAGRGGATRPNGPNAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFL
TQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKEL
QRQASPNIVIALAGNKADLASKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIA
KKLPKNEPQAPGSSAGRNRGVDLAETAQPAKGPCCSN
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaagaggcggtgctacaagacctaacgggccgaacgcagccagcaataaaatc
tgtcagtttaaactagtgctgctgggcgagtctgcagtgggaaagtccagcctggtgctg
cgcttcgtcaagggccagttccatgagtttcaggagagcacgataggagcggccttcctg
actcagacggtatgtctggatgacacgacggtgaagtttgagatctgggacacagccggt
caggagcgctaccacagtttggctccgatgtattacagaggagcgcaggcagccatcgtg
gtgtatgacatcacaaacgaagaatcatttgcacgtgcgaagaattgggttaaagagctt
cagaggcaagccagccctaatatcgtaatagctctggctggaaacaaagcagatcttgcc
agcaagagagcactggactttcaggatgcacagtcttatgcagatgacaacagtttgctt
ttcatggaaacgtcagcgaagacgtcgatgaacgtgaacgagatctttatggctatcgca
aagaaacttcccaagaacgagccacaggcacccggatcgagtgcaggccgaaatcgagga
gtggacctggcagagacagcacagcctgccaaagggccatgctgcagcaactaa
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integrated database retrieval system
