KEGG   Ictalurus punctatus (channel catfish): 100528367
Entry
100528367         CDS       T04658                                 
Symbol
magoh
Name
(RefSeq) protein mago nashi homolog
  KO
K12877  protein mago nashi
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03013  Nucleocytoplasmic transport
ipu03015  mRNA surveillance pathway
ipu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100528367 (magoh)
  09122 Translation
   03013 Nucleocytoplasmic transport
    100528367 (magoh)
   03015 mRNA surveillance pathway
    100528367 (magoh)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ipu03019]
    100528367 (magoh)
   03041 Spliceosome [BR:ipu03041]
    100528367 (magoh)
Messenger RNA biogenesis [BR:ipu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100528367 (magoh)
Spliceosome [BR:ipu03041]
 Complex C
  Other components
   EJC/TREX
    100528367 (magoh)
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 100528367
NCBI-ProteinID: NP_001187566
Ensembl: ENSIPUG00000002136
UniProt: E3TEU1
LinkDB
Position
5:complement(23359546..23362037)
AA seq 147 aa
MSTNDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEE
LKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGL
RVFYYLVQDLKCLVFSLIGLHFKIKPI
NT seq 444 nt   +upstreamnt  +downstreamnt
atgtccacgaacgacttttatttacgatattacgtgggacataaagggaaattcggtcac
gagtttctggagtttgaattcaggccggacgggaagctgagatacgcgaacaacagtaac
tacaaaaatgacgtcatgatcaggaaagaggcgtacgttcacaagagcgtgatggaggaa
ctgaagaggatcattgacgacagtgaaatcacgaaggaagacgatgcactgtggcctcct
cctgacagggtgggcagacaggaactggagattgtcattggtgacgaacatatctcattc
acaacttccaaaattgggtctctgatcgatgtcaaccagtctaaggatccagaaggcctc
agagtgttctactacctggtacaggatctcaagtgtctcgtcttcagtctcatcggcctc
cattttaagattaagccgatctaa

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