KEGG   Ictalurus punctatus (channel catfish): 100528377
Entry
100528377         CDS       T04658                                 
Symbol
polr2h
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC3
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03020  RNA polymerase
ipu03420  Nucleotide excision repair
ipu04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100528377 (polr2h)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100528377 (polr2h)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ipu03021]
    100528377 (polr2h)
   03400 DNA repair and recombination proteins [BR:ipu03400]
    100528377 (polr2h)
Transcription machinery [BR:ipu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     100528377 (polr2h)
  RNA polymerase III system
   RNA polymerase III
     100528377 (polr2h)
  RNA polymerase I system
   RNA polymerase I
     100528377 (polr2h)
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100528377 (polr2h)
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 100528377
NCBI-ProteinID: NP_001187576
Ensembl: ENSIPUG00000024331
UniProt: E3TEV3
LinkDB
Position
10:18590852..18598914
AA seq 150 aa
MAGILFEDIFDVKDIDPDGKKFDRVSRLHCESESFKMDLILDVNTQIYPVELGDKFRLVI
ASTLYEDGTSDDGEYNPTDDRPSRADQFDYAMYGKVYKIEGDETSTEAATRLSAYVSYGG
LLMRLQGDANNLHGFEVDSRVYLLMKKLAF
NT seq 453 nt   +upstreamnt  +downstreamnt
atggctgggattctgtttgaggatatctttgatgtgaaagacattgatcctgatgggaag
aagtttgacagagtgtctcgtcttcactgtgagagcgagtcgtttaaaatggacctgatc
ctggatgtgaacactcagatttacccggtcgagctcggcgataagttcaggctggtgatc
gccagcacgctgtatgaggacggcacttcggacgatggcgagtacaatcccactgacgac
cgaccgtccagggcggaccagtttgattacgccatgtacggtaaagtgtataagatcgag
ggagacgagacttcgacagaagcagcgacacggctttctgcgtacgtgtcgtacggtggc
ctgttgatgcgacttcagggtgacgccaacaacctgcacggctttgaggtcgattcccga
gtttacctgctcatgaagaaacttgcattctaa

DBGET integrated database retrieval system