Ictalurus punctatus (channel catfish): 100528389
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Entry
100528389 CDS
T04658
Symbol
eif4a1a
Name
(RefSeq) eukaryotic translation initiation factor 4A1A
KO
K03257
translation initiation factor 4A
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
100528389 (eif4a1a)
03012 Translation factors [BR:
ipu03012
]
100528389 (eif4a1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
100528389 (eif4a1a)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100528389 (eif4a1a)
mRNA cycle factors
Stress granule specific factors
100528389 (eif4a1a)
Translation factors [BR:
ipu03012
]
Eukaryotic type
Initiation factors
eIF-4
100528389 (eif4a1a)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100528389 (eif4a1a)
Exosomal proteins of bladder cancer cells
100528389 (eif4a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
100528389
NCBI-ProteinID:
NP_001187588
Ensembl:
ENSIPUG00000005117
UniProt:
E3TEX0
LinkDB
All DBs
Position
7:16662741..16668492
Genome browser
AA seq
406 aa
AA seq
DB search
MSAEHEHRPRDNGPEGMEPDGVIEGNWKEIVDSFDDMNLRENLLRGIYAYGFEKPSAIQQ
RAILPCIKGYDVIAQAQSGTGKTATFAISILQQIDIELKGTQAMVLAPTRELAQQIQKVV
LALGDYMGATCHACIGGTNVRNEVQKLQADVPHIVVGTPGRVFDMLNRRYLSPKYIKMFA
LDEADEMLSRGFKDQIYEIFQKLSTDIQVILLSATMPQEVLEVTTKFMRDPVRILVKKEE
LTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVS
ALHGDMDQKERDLIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRI
GRGGRFGRKGVAINMVTEDDKRTLRDIETFYNTTVEEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgaacatgaacatagacctagagacaatggccccgagggcatggagccagat
ggagtcattgagggtaactggaaggagattgtcgacagctttgatgacatgaacctgcgt
gagaatcttctcaggggaatatatgcctatggttttgagaaaccttctgccattcagcag
agggcaattctcccttgtatcaaggggtatgatgtcatcgctcaggctcagtctggcaca
gggaagacagccacgtttgctatctctatcctgcaacagattgatattgagctgaagggc
actcaagccatggtcctggccccgaccagagagcttgctcaacagatccaaaaggtggtt
cttgcccttggagactacatgggtgctacctgccatgcctgcattggtggcaccaacgtc
cgtaacgaggtgcagaagctccaggctgatgtgccccacatagtggttggaacccctgga
cgtgtctttgacatgcttaaccggcgctatctctcacccaaatacataaagatgtttgca
ttggatgaagctgatgagatgttgagccgaggattcaaggaccaaatttacgagattttc
cagaagctatctactgacattcaggtgatcctgttgtcagccaccatgccccaggaggtg
ctggaggtcaccaccaagttcatgagagaccctgtaaggatcttggtcaagaaagaggag
ctgaccctggagggtattcgtcagttctacattaacgtggagagggaggagtggaagctg
gacacactatgtgacctgtatgagacattgaccatcactcaagctgttatcttcattaac
acacgccggaaggtggattggctgactgagaagatgcatgctagagattttacagtctct
gctttgcatggagacatggaccagaaggagagagatttaatcatgaaggagttccgctct
ggctccagtcgtgtcctcatcaccactgacctgctggctcgaggaattgatgtgcagcag
gtttctctggtcatcaactatgatttgcccacaaacagggagaattatatccacaggatt
ggacgtggtggccgtttcggcagaaagggtgtcgctatcaacatggtgactgaggatgac
aagcgcacgctccgggacattgagaccttctacaacacaactgtggaggagatgcccatg
aatgtggccgacttgatctga
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integrated database retrieval system
