Ictalurus punctatus (channel catfish): 100528424
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Entry
100528424 CDS
T04658
Symbol
rhocb
Name
(RefSeq) rho-related GTP-binding protein RhoA-D
KO
K04513
Ras homolog gene family, member A
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04081
Hormone signaling
ipu04144
Endocytosis
ipu04150
mTOR signaling pathway
ipu04270
Vascular smooth muscle contraction
ipu04310
Wnt signaling pathway
ipu04350
TGF-beta signaling pathway
ipu04510
Focal adhesion
ipu04517
IgSF CAM signaling
ipu04519
Cadherin signaling
ipu04520
Adherens junction
ipu04530
Tight junction
ipu04621
NOD-like receptor signaling pathway
ipu04625
C-type lectin receptor signaling pathway
ipu04810
Regulation of actin cytoskeleton
ipu05100
Bacterial invasion of epithelial cells
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100528424 (rhocb)
04350 TGF-beta signaling pathway
100528424 (rhocb)
04150 mTOR signaling pathway
100528424 (rhocb)
09133 Signaling molecules and interaction
04081 Hormone signaling
100528424 (rhocb)
04517 IgSF CAM signaling
100528424 (rhocb)
04519 Cadherin signaling
100528424 (rhocb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100528424 (rhocb)
09144 Cellular community - eukaryotes
04510 Focal adhesion
100528424 (rhocb)
04520 Adherens junction
100528424 (rhocb)
04530 Tight junction
100528424 (rhocb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
100528424 (rhocb)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100528424 (rhocb)
04625 C-type lectin receptor signaling pathway
100528424 (rhocb)
09153 Circulatory system
04270 Vascular smooth muscle contraction
100528424 (rhocb)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100528424 (rhocb)
05100 Bacterial invasion of epithelial cells
100528424 (rhocb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
100528424 (rhocb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
100528424 (rhocb)
04031 GTP-binding proteins [BR:
ipu04031
]
100528424 (rhocb)
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
100528424 (rhocb)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100528424 (rhocb)
Exosomal proteins of other body fluids (saliva and urine)
100528424 (rhocb)
Exosomal proteins of colorectal cancer cells
100528424 (rhocb)
Exosomal proteins of bladder cancer cells
100528424 (rhocb)
GTP-binding proteins [BR:
ipu04031
]
Small (monomeric) G-proteins
Rho Family
RhoA/B/C [OT]
100528424 (rhocb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
SRPRB
VASP_tetra
Motif
Other DBs
NCBI-GeneID:
100528424
NCBI-ProteinID:
NP_001187623
Ensembl:
ENSIPUG00000004722
UniProt:
E3TF13
LinkDB
All DBs
Position
5:25187584..25225201
Genome browser
AA seq
193 aa
AA seq
DB search
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDT
AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD
LRNDEHTRRELAKMKQEPVKPEEGRDMANRISAFGYLECSAKTKEGVREVFEMATRAALQ
VRKRKKRSGCLLL
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggcagccatccgtaagaagctggtgattgtaggagatggagcatgtggaaagacatgt
cttctcatcgttttcagtaaagatcagttccctgaggtctacgtgcctactgtatttgag
aactacatcgctgacatcgaagtggatggtaaacaggttgagctggctttatgggacaca
gcaggacaggaggactatgataggttgaggccgttgtcctatccagacacagacgtcatc
ctcatgtgtttctccatagacagtcctgacagtttagagaacattccggagaagtggaca
ccagaggtgaagcatttctgtcctaatgttcccatcatcctggtggggaacaagaaagac
ctgcgcaatgatgagcacactcgcagggagctggccaagatgaagcaggagccagtgaag
cctgaggaaggcagagacatggctaacaggatcagcgcatttggttatctggagtgctct
gctaaaactaaagagggtgtgcgggaggtgttcgagatggccaccagggcagcgctgcag
gtccgcaagcgcaagaagagaagcggctgtctgctcttatga
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