Ictalurus punctatus (channel catfish): 100528436
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Entry
100528436 CDS
T04658
Symbol
rragca
Name
(RefSeq) ras-related GTP binding Ca
KO
K16186
Ras-related GTP-binding protein C/D
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04140
Autophagy - animal
ipu04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
100528436 (rragca)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100528436 (rragca)
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GFIT
Motif
Pfam:
Gtr1_RagA
Arf
Roc
GTP_EFTU
SRPRB
Ras
AAA_14
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
100528436
NCBI-ProteinID:
NP_001187635
Ensembl:
ENSIPUG00000017227
UniProt:
E3TF29
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All DBs
Position
1:complement(23107180..23158009)
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AA seq
381 aa
AA seq
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MSIQYGETLADSYGVADSFPKDFGYGEEETDVEDSPAPSDSKPRILLMGLRRSGKSSIQK
VVFHKMSPNETLFLESTNKIYKDGLSSSSFVNFQIWDFPGQVDFFDPTFDCEMIFRGTGA
LIFVIDAQDDYVEALGRLHLTVSRAYRVNPEINFEVFIHKVDGLSDDHKIETQRDIHQRA
NDDLADASLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNIFISNSGIEKA
FLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYGLKEDGSGSAYDKESMAIIK
LNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNFHCFRKAIHEVFEVGLSTPRMGAQ
AAGTPCLMKTVALNGTPRSTV
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattcagtacggagaaacactggcagatagctatggggtggctgattcgttcccc
aaagatttcggttatggagaagaggagacagacgtggaggacagtccagcaccctccgac
agcaagccgagaatactactaatgggcttgcgaaggagcgggaagtcctccattcagaag
gtcgtgtttcataagatgtcccctaatgagaccctgtttctggagagcacaaataaaatc
tacaaggatggcctctccagcagctcctttgtcaactttcagatctgggactttcctggt
caagtagacttttttgacccgacctttgattgtgaaatgatcttcagaggaaccggcgcc
ttgatatttgtcattgatgcacaggatgactacgtggaggctcttggcagactccactta
acggtatctcgggcctatcgcgtcaaccctgaaatcaactttgaagtgttcatccataaa
gttgacggcctgtctgacgaccacaaaattgagacgcagagggatattcaccagagggct
aatgatgacctggctgatgccagcttggagaaactgcatcttagcttctatttgacaagt
atctatgaccactctatatttgaggcgttcagtaaagtggttcagaagctcattccccag
ctgccaaccctggagaaccttctcaacatttttatttctaattcagggattgaaaaggct
ttcctgttcgatgtggttagtaagatctacatcgccacagacagttcaccggtagacatg
cagtcctatgagctgtgctgtgacatgattgacgtggtcattgacgtgtcgtgcatctat
ggattaaaggaagatggcagtggcagtgcctacgacaaggagtcaatggcgatcattaaa
ctcaataacaccactgtcctctacctgaaagaagtcaccaagtttcttgcccttgtctgt
attcttagagaagagagcttcgagcgcaaaggcttaatagactacaatttccactgtttc
cggaaagcgattcatgaagtgtttgaggttggtctgtccacaccgaggatgggagctcag
gctgctggaacgccctgcttgatgaagacggtggcactgaatggcaccccccggagcacc
gtgtag
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