Ictalurus punctatus (channel catfish): 100528602
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Entry
100528602 CDS
T04658
Symbol
supt4h1
Name
(RefSeq) transcription elongation factor SPT4
KO
K15171
transcription elongation factor SPT4
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100528602 (supt4h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
100528602 (supt4h1)
03019 Messenger RNA biogenesis [BR:
ipu03019
]
100528602 (supt4h1)
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100528602 (supt4h1)
RNA polymerase I system
100528602 (supt4h1)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
100528602 (supt4h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
100528602
NCBI-ProteinID:
NP_001187801
Ensembl:
ENSIPUG00000012062
UniProt:
E3TFQ2
LinkDB
All DBs
Position
28:13237590..13242163
Genome browser
AA seq
117 aa
AA seq
DB search
MSLETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCESCLQMKGNREMVYECTSSSFDGV
IAMMSPEDSWVAKWQRIGNFKAGVYAVTVTGRLPPGVVRELKSRGVIYRSRDTAVKT
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgtccttggagaccgtaccaaaagatcttcgtcatctgcgggcttgtctgctatgttct
ctcgtcaagactattgaccagttcgagtatgacggctgcgataactgtgagtcctgcctg
caaatgaaggggaaccgggagatggtttatgaatgcacaagctcctcctttgatggtgtc
attgcaatgatgagtcctgaagacagctgggtggctaagtggcaaagaataggaaatttc
aaggcaggtgtctatgctgtaaccgtaactggaaggttacctccaggagtggtgcgagaa
ctaaagagcagaggagtcatctacaggtccagagacacggcagtgaagacgtag
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