Ictalurus punctatus (channel catfish): 100528612
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Entry
100528612 CDS
T04658
Symbol
fen1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03030
DNA replication
ipu03410
Base excision repair
ipu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100528612 (fen1)
03410 Base excision repair
100528612 (fen1)
03450 Non-homologous end-joining
100528612 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ipu03032
]
100528612 (fen1)
03400 DNA repair and recombination proteins [BR:
ipu03400
]
100528612 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
100528612 (fen1)
DNA replication proteins [BR:
ipu03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
100528612 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
100528612 (fen1)
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
100528612 (fen1)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100528612 (fen1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
TPR_AP5Z1
Motif
Other DBs
NCBI-GeneID:
100528612
NCBI-ProteinID:
NP_001187811
Ensembl:
ENSIPUG00000001277
UniProt:
E3TFR6
LinkDB
All DBs
Position
1:5015832..5026255
Genome browser
AA seq
380 aa
AA seq
DB search
MGIHGLAKLIADQAPTAIREQDIKNYFGRKIAIDASMCIYQFLIAVRRDGNVLQNDDGET
TSHLMGMFYRTIRMLDSGIKPVYVFDGKPPQLKSGELEKRGERRAEAEKLLAQAQEMGEQ
ENIDKFSKRLVKVTKQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKAYATATEDM
DGLTFGTSVLLRHLTASEAKKLSIQEFHFSRVLQEMSLSHQQFIDLCILLGCDYCGTIKG
IGPKRAIDLIKQYGSIEEILDNIDQSKHPAPEDWLYKEARALFLEPEVVDCTAMELKWNE
PDEDGLVQFMCSEKQFSEDRIRNGCKKIMKSRRGSTQGRLDTFFTVTGSISSKRKEPEVK
GSAKKKQKTSATPGKFKKGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcacggcctcgccaagttaatagctgatcaggcgccgacagccatcagggag
caggatattaaaaattacttcgggcgcaagatcgccatagatgcctccatgtgcatttac
cagttcctgatcgccgtcaggcgggacggcaacgtcttacagaacgacgatggcgagacg
acgagccacctgatgggcatgttctacaggaccatacgcatgctggacagtggcatcaag
cccgtgtacgtgtttgacgggaagccccctcagctcaagtccggagagttggagaagaga
ggggagcggagagcagaagccgaaaagctgctagcacaagcacaggaaatgggtgaacag
gagaacatcgacaagttcagcaaacgtctcgtaaaagtcaccaagcagcataacgacgag
tgtaaaaaactcctcacgttaatgggagtgccctatatagaggctccgtgtgaggccgag
gccagctgtgcggctctggtgaaggcaggaaaggcgtacgccacggcgaccgaagatatg
gacggattaacttttggaacaagcgtcctgctgagacacctaaccgccagtgaagccaag
aaactctccatccaggagtttcacttcagccgcgttctgcaggagatgagcttgtcacat
caacagttcatcgatttatgcatcctactgggctgcgactactgcggcacaatcaaaggg
atcggccccaagagagcaatcgacctcatcaaacaatacggttcgatcgaagaaatcctc
gacaacatcgaccaatcgaaacaccctgccccagaagactggctttacaaggaggctcga
gccctgtttctggagcccgaggtggtggactgtaccgccatggagctcaagtggaacgag
cccgacgaggacggactggtccagtttatgtgcagcgagaagcagttcagtgaggatcgt
atccgtaacggctgcaagaaaatcatgaaaagcagacgggggagcactcaagggagactg
gacacgttctttaccgtcacaggatccatctcttctaaacgcaaggagcctgaagtaaaa
ggctcagccaagaagaaacagaagacaagtgcaacaccaggcaagttcaagaagggaaaa
tga
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integrated database retrieval system
