Ictalurus punctatus (channel catfish): 100528648
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Entry
100528648 CDS
T04658
Symbol
chmp5b
Name
(RefSeq) charged multivesicular body protein 5
KO
K12198
charged multivesicular body protein 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
ipu04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100528648 (chmp5b)
09143 Cell growth and death
04217 Necroptosis
100528648 (chmp5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
100528648 (chmp5b)
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
100528648 (chmp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
NPV_P10
Prefoldin_2
Big_3_3
Histone_HNS_N
Alpha-E
Hydantoinase_B
DUF948
RUBC_PIKBD
GrpE
FliJ
Motif
Other DBs
NCBI-GeneID:
100528648
NCBI-ProteinID:
NP_001187847
Ensembl:
ENSIPUG00000016007
UniProt:
E3TFW5
LinkDB
All DBs
Position
7:complement(12587455..12595498)
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AA seq
220 aa
AA seq
DB search
MNRIFGRGKPKGPPPNLTDCIGSVDSRAESIDKKISRLDAELMKYKDQMKKMRDGPSKNM
VKQKAMRVLKQKRMYEGQRDQLMQQSFNMEQANYTIQTLKDTKTTVDAMKIGAKEMKKAY
KNVKIDQIEDLQDQLEDMMEDANEVQEAMSRSYGTPDIDEDDLEAELDALGDELLLDDDS
SYLDEVSSAPAIPEGTPGERSTNRDGVLVDEFGLPQIPAS
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcattttcggcagaggaaaacccaaaggaccaccgcccaaccttacggactgt
ataggaagcgttgattctcgggccgagtccatcgataagaagatatccagacttgatgct
gaactcatgaaatataaagatcagatgaagaaaatgagagatggtccatcaaagaatatg
gtgaagcagaaagccatgcgggtccttaaacagaaaagaatgtatgaaggacagagagat
cagctgatgcagcagtcatttaacatggagcaggccaactacaccattcagacacttaaa
gacaccaaaacaactgtggatgctatgaagattggagccaaagaaatgaagaaggcttac
aagaatgtgaagattgatcagattgaggatcttcaagaccagttggaggacatgatggag
gatgctaatgaagtacaggaggctatgagccgcagctacggaacaccagatatcgatgaa
gacgatctagaagcagagctggatgcactcggcgatgagctgcttttggacgatgacagc
tcttaccttgacgaggtctcgtcagctccagctataccagaaggcactccaggagagagg
agcaccaaccgggatggagttctggtcgatgaatttggacttcctcagattccagcatca
taa
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