Ictalurus punctatus (channel catfish): 100528684
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Entry
100528684 CDS
T04658
Symbol
snf8
Name
(RefSeq) vacuolar-sorting protein SNF8
KO
K12188
ESCRT-II complex subunit VPS22
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100528684 (snf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
100528684 (snf8)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
100528684 (snf8)
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
100528684 (snf8)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100528684 (snf8)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
CDK5RAP3
DotZ
RPA_interact_C
DUF4896
Motif
Other DBs
NCBI-GeneID:
100528684
NCBI-ProteinID:
NP_001187883
Ensembl:
ENSIPUG00000000554
UniProt:
E3TG14
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All DBs
Position
13:complement(13324962..13327166)
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AA seq
258 aa
AA seq
DB search
MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQIAQMSKQLETFKTHLEEFASKHKQEIRK
SPQFRAQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LDELHQRVLKGRGKFAQDVSQDDLVRAIKKLKAMGNGFGMIPVGGSYLVQSVPAELNMDH
TVVLQLAEKKGYVTVSETKDNLKWEKERACHVLDDLLKEGLAWLDTQAAGEPQYWLPALF
SELSSRDVTPEEENQMTP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcacagaagaggagttggagcaggggctatcgctaagaagaaacttgcagaggccaag
tacaaagagagaggtacagtcttggctgaagatcagattgcacagatgtctaagcagtta
gaaactttcaaaacacatttggaagagtttgctagcaaacacaagcaagagataagaaag
agtccacagttcagggcgcagtttcaagaaatgtgtgccacaataggagtggatcccctg
gcatctggtaaaggattttggtctgagatgctcggagttggagacttctattatgagctt
ggagtgcagataattgaagtctgtctagctctaaagcacagaaatggcggactaattaca
ctggatgaacttcatcagcgtgtattaaagggaagagggaagtttgcacaagatgtgagt
caagatgatttagtacgagccatcaaaaagcttaaggcaatgggaaacggctttgggatg
attcctgttggaggttcttatttagtccagtcagttccggctgagcttaatatggatcac
actgttgttcttcagctggctgagaaaaagggttatgtaacagtaagcgagaccaaggac
aaccttaagtgggagaaagaacgtgcttgccatgtacttgacgacctgctgaaagaaggg
ctggcatggttggatacccaggctgcaggagaaccacaatactggctgcctgccctcttc
tctgaactatcttctcgtgatgtcactcctgaggaagagaatcagatgacaccatga
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