Ictalurus punctatus (channel catfish): 100528730
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Entry
100528730 CDS
T04658
Symbol
vamp8
Name
(RefSeq) vesicle-associated membrane protein 8
KO
K08512
vesicle-associated membrane protein 8
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04130
SNARE interactions in vesicular transport
ipu04140
Autophagy - animal
ipu04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100528730 (vamp8)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
100528730 (vamp8)
04140 Autophagy - animal
100528730 (vamp8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
100528730 (vamp8)
Membrane trafficking [BR:
ipu04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
100528730 (vamp8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Synaptobrevin
CD34_antigen
Baculo_F
Ferlin_C
Prominin
SpoIIM
LRRC37AB_C
Orf78
DUF3619
ODV-E18
DUF4212
RIFIN
Fzo_mitofusin
GP41
Motif
Other DBs
NCBI-GeneID:
100528730
NCBI-ProteinID:
NP_001187929
Ensembl:
ENSIPUG00000022474
UniProt:
E3TG77
A0A2D0PGT6
LinkDB
All DBs
Position
22:complement(2459507..2467387)
Genome browser
AA seq
124 aa
AA seq
DB search
MGVGDPNRLEQGASAPAVEVEPVKSLQSQVDGVKDIMTQNVERILARGERLDDLMDKSED
LQAGAQNFKHTSQKVARAYWWKNVKLIVVMVVIVAIIVLIIVLLATGVIPTNGQSTSPTT
KPPK
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atgggagttggagatccaaacagactggaacagggggcgtcggctccggcggtggaagtg
gaaccggtgaagtcgctgcagtctcaggtggatggcgtgaaagacatcatgacccagaac
gtggagcgaatcctggcacgcggagaacggctcgatgatctgatggacaaatccgaggac
ctgcaggccggggcgcagaacttcaagcacacgtcgcagaaggtggcacgcgcctactgg
tggaagaacgtgaagctgatcgtggtgatggtcgtgattgttgccatcatcgtgctcatc
atcgtgttgctcgctacaggagtgatcccgacaaatggccagtcgacatcaccgactacc
aaaccaccaaagtaa
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integrated database retrieval system
