KEGG   Ictalurus punctatus (channel catfish): 100528771
Entry
100528771         CDS       T04658                                 
Symbol
rpa3
Name
(RefSeq) replication protein A 14 kDa subunit
  KO
K10740  replication factor A3
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03030  DNA replication
ipu03420  Nucleotide excision repair
ipu03430  Mismatch repair
ipu03440  Homologous recombination
ipu03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100528771 (rpa3)
   03420 Nucleotide excision repair
    100528771 (rpa3)
   03430 Mismatch repair
    100528771 (rpa3)
   03440 Homologous recombination
    100528771 (rpa3)
   03460 Fanconi anemia pathway
    100528771 (rpa3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ipu03032]
    100528771 (rpa3)
   03400 DNA repair and recombination proteins [BR:ipu03400]
    100528771 (rpa3)
DNA replication proteins [BR:ipu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    100528771 (rpa3)
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     100528771 (rpa3)
   MMR (mismatch excision repair)
     100528771 (rpa3)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     100528771 (rpa3)
SSDB
Motif
Pfam: Rep_fac-A_3 NMD3
Other DBs
NCBI-GeneID: 100528771
NCBI-ProteinID: NP_001187970
Ensembl: ENSIPUG00000017268
UniProt: E3TGD7
LinkDB
Position
12:27356798..27361155
AA seq 122 aa
MTGVFEAPKTRINASMLSQYVSRPVCFIGRVGKVHPSGKSFTLTDGEGKNASVELNDPLE
EELSGIVEVIGMVSNKGTIMAAVYNMFREEKGISFDLELYNEALKVLHDFPQYYPFEVSS
SG
NT seq 369 nt   +upstreamnt  +downstreamnt
atgacgggtgtattcgaggctccaaaaaccaggataaacgcgtcgatgctctctcagtac
gtgagcaggccggtgtgtttcatagggcgcgtgggaaaggtccatccatctggcaaatcg
ttcacgttgaccgacggagagggaaagaatgcatccgtggagcttaacgatcctctggaa
gaggagttgagcggaatagtggaagttatcggaatggtgtcgaataaaggaaccatcatg
gctgcggtgtacaacatgttcagggaggagaaaggaatttcctttgatttggagctgtat
aacgaggccctgaaagtgcttcacgattttccgcagtattaccctttcgaggtgtcgtcg
agcggatga

DBGET integrated database retrieval system