Ictalurus punctatus (channel catfish): 100528796
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Entry
100528796 CDS
T04658
Symbol
tsg101b
Name
(RefSeq) tumor susceptibility 101b
KO
K12183
ESCRT-I complex subunit TSG101
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03250
Viral life cycle - HIV-1
ipu03272
Virion - Hepatitis viruses
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100528796 (tsg101b)
03272 Virion - Hepatitis viruses
100528796 (tsg101b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100528796 (tsg101b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
100528796 (tsg101b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
100528796 (tsg101b)
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
100528796 (tsg101b)
Exosome [BR:
ipu04147
]
Exosomal proteins
Proteins found in most exosomes
100528796 (tsg101b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
HAUS1
TPR_IF140_C
RasGAP_C
UQ_con
Exonuc_VII_L
Prominin
DUF5685
DUF3450
DUF2797
DUF4200
Motif
Other DBs
NCBI-GeneID:
100528796
NCBI-ProteinID:
NP_001187995
Ensembl:
ENSIPUG00000022428
UniProt:
E3TGH0
LinkDB
All DBs
Position
27:9406722..9414897
Genome browser
AA seq
389 aa
AA seq
DB search
MAVNENTLRKMLAKSYKYRDLTIRDVTNVTNQYRDLKTVMDIYVFNDGNNRELLSLTGTV
PVNFKGTVYNIPICLWLLDTYPYNPPICFVKPTSAMMIKTGKHVDANGKIYLPYLHEWKH
PESDLFGLIQVMIVVFGEEPPVFARPTTQTAYPGFQAAGPPNASYLPNTPSTPFGQSYSP
NPGGFQGYPYPAATSGYPATSGTPHYTPTTAGGPSRDATIGEDTIRASLVSAVSDKLRWR
MKEKMDRSQAELDALKRTEEDLKKGHQKLEEMVSKLDQEIADVDRNVELQKKKDEELTAA
LDKMEQQSENSDIDELLVPTAPLYRQILNLYAEENAIEDTIFYLGEALRRDIIDLDVFLK
HVRLLSRKQFQLRALMQKARKTAGLSDLY
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaaacgaaaatactcttcggaaaatgctggctaagagttataaatacagagac
ctgaccattagggatgttactaatgtgacaaatcagtacagggacctgaagactgtgatg
gacatttatgtgttcaacgatggcaacaacagagagttactgagtcttacaggaactgta
ccagtgaactttaaaggaactgtatacaacattcccatttgcctgtggctgctagacacc
tatccatacaatcctcccatctgctttgtcaagcccaccagtgccatgatgatcaaaaca
gggaaacatgtcgatgccaatggaaaaatctacctcccgtatttgcatgaatggaaacat
ccggagtcagatttgtttggactgatccaggtgatgattgtggtttttggagaagagcca
ccagtttttgccaggcccaccacacagaccgcttatccaggattccaagctgctggtcca
cctaacgcttcctacctgccaaacacaccaagcactccatttggccagagttactctcct
aacccaggagggtttcaaggttatccctaccctgctgccacttctggatacccagccaca
tctggaacaccacactatactcccaccacagctggaggtcccagtcgtgatgccaccatt
ggtgaggacacaatccgagcatctctggtgtctgcagtgagcgataagctgcgctggcgg
atgaaggagaagatggaccgatctcaggctgaactggatgctctcaagaggaccgaggag
gacctgaaaaagggacaccagaagctggaggagatggtgtccaaactggaccaagagata
gctgatgtggacagaaacgtagaactgcagaagaagaaggatgaggagctcacagctgct
ctggacaaaatggagcagcaatcagagaatagtgatatcgatgaactcctcgtacccaca
gcgccactataccgccaaattctgaacctgtatgctgaagagaacgctatcgaagacact
atcttctatctgggtgaggctctacgcagagacatcatcgacttggacgtcttcctcaag
catgtgagacttctctcacggaagcagttccagttgcgtgctttgatgcagaaagccaga
aaaactgcaggcctcagcgacctctactga
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integrated database retrieval system
