KEGG   Ictalurus punctatus (channel catfish): 100528841
Entry
100528841         CDS       T04658                                 
Symbol
cln8
Name
(RefSeq) protein CLN8
  KO
K12360  ceroid-lipofuscinosis neuronal protein 8
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    100528841 (cln8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    100528841 (cln8)
Membrane trafficking [BR:ipu04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    100528841 (cln8)
SSDB
Motif
Pfam: TRAM_LAG1_CLN8
Other DBs
NCBI-GeneID: 100528841
NCBI-ProteinID: NP_001188040
Ensembl: ENSIPUG00000015918
UniProt: A0A2D0PH62 E3TGN1
LinkDB
Position
9:29168294..29171832
AA seq 282 aa
MDGTVNGEKPHPTSCIFDLDYSSTSVQLQLFGLGFGFYSLVFLLTYFLSALLSQTYRSLS
AKEKVFWCLAATRAIFGLQGSWAGLRALMEDGPLFSDKVLGQTGWSWFTLLTACGFFAFE
NVALHGSNLVFRSFDAPLAAHHAFALAGFSGTALYADMGHFLAIITLLLEMSTPFTCISW
MLLKAGWCRTLLWRANQWLMIHMFHCRMVLMYYMWWVCWCHWPELLVHIPLPQLLIFLVG
LALLTLIINPLWLHKKTMQLLNPVDWNFSSKPAPENGKAHRN
NT seq 849 nt   +upstreamnt  +downstreamnt
atggacggcacggtgaatggagagaagcctcatcctacaagctgcatcttcgacctggac
tacagctccacatctgtacagctgcagctcttcggcctcggcttcggcttctacagcctc
gtcttcctcctgacttacttcctgtctgccctgctgtcccagacctaccgctctctgtcc
gctaaagagaaggtgttctggtgtttggcggcgacgcgggcgatcttcggcttgcagggg
tcgtgggcggggttacgggcgctgatggaggacggcccattgttcagcgataaggtgctc
ggacagacgggctggtcatggttcaccttgctgactgcgtgtgggttcttcgccttcgag
aacgtcgctctgcacggctccaatctggtgttccgctccttcgacgctccgctcgccgcc
catcacgccttcgccctggccggcttcagcgggaccgcgctgtacgcagacatgggccac
ttcctggccatcatcacgctgctgctggagatgagcacgcccttcacctgcatctcctgg
atgctgctcaaggctggttggtgtcgtactctgctgtggcgagcgaatcagtggttgatg
atccacatgttccactgccgcatggtgctgatgtactacatgtggtgggtgtgttggtgt
cactggcccgaactgcttgtgcacattcctcttcctcagctcctcatcttcctcgtcggc
ctggcgctcctcacgctcatcatcaaccccctgtggctgcacaagaagaccatgcagctc
ctcaaccccgtcgactggaacttcagcagcaagccagcacccgagaacggcaaagcccac
aggaactga

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