Ictalurus punctatus (channel catfish): 100528854
Help
Entry
100528854 CDS
T04658
Symbol
tbpl1
Name
(RefSeq) TATA box-binding protein-like 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100528854 (tbpl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
100528854 (tbpl1)
03021 Transcription machinery [BR:
ipu03021
]
100528854 (tbpl1)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
100528854 (tbpl1)
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100528854 (tbpl1)
RNA polymerase III system
TFIIIB
100528854 (tbpl1)
RNA polymerase I system
SL1/TIF-1B
100528854 (tbpl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
P22_Gp10_C
Motif
Other DBs
NCBI-GeneID:
100528854
NCBI-ProteinID:
NP_001188053
Ensembl:
ENSIPUG00000010601
UniProt:
A0A2D0PI09
E3TGP6
LinkDB
All DBs
Position
15:21994097..22001857
Genome browser
AA seq
186 aa
AA seq
DB search
MEPSNDVALDIIITNVVSVFRTRCHLNLRTIGLEGNNVIYRPEVGKVLMKLRKPRITASI
WSSGKIICTGATSEDEAKVGARRLARCLQKIGFKVRFSDFKVVNVLAVCSMPFQIRLIEF
TKNNRPIASYELELHPAASYRIKTLRATVQVFSTGSVTVTGPNVQSVASAVEQIYPLLFE
CQKKLA
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgagtaacgatgtggcgctggacattatcatcacaaacgtggtttctgtcttc
aggaccaggtgtcatttaaacctgcgcactatcggcctggaggggaataacgtcatctac
agaccggaagtagggaaagtacttatgaagctccgcaaacctcgcatcactgcctccata
tggtcatcagggaaaatcatttgcactggagcaacaagtgaggacgaggctaaagtgggt
gccaggaggttggcccgctgcctccagaagataggattcaaggtcaggttttcagatttt
aaggtcgtaaacgtcctggcagtgtgctccatgccttttcagatccgcctcatcgagttc
accaagaacaaccgtcccatagccagctacgagcttgagcttcacccagctgcatcgtac
agaattaaaacccttagagcaacagtgcaggtgttctccacaggcagcgtcacagttaca
ggaccaaatgttcagagtgttgcctcagctgtggaacagatatatcctctattgttcgag
tgtcagaaaaaactggcgtaa
DBGET
integrated database retrieval system