Ictalurus punctatus (channel catfish): 100529021
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Entry
100529021 CDS
T04658
Symbol
chmp1a
Name
(RefSeq) charged multivesicular body protein 1a
KO
K12197
charged multivesicular body protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03272
Virion - Hepatitis viruses
ipu04144
Endocytosis
ipu04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100529021 (chmp1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100529021 (chmp1a)
09143 Cell growth and death
04217 Necroptosis
100529021 (chmp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
100529021 (chmp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
100529021 (chmp1a)
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
100529021 (chmp1a)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100529021 (chmp1a)
Exosomal proteins of other body fluids (saliva and urine)
100529021 (chmp1a)
Exosomal proteins of colorectal cancer cells
100529021 (chmp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
Ist1
DUF5871
Motif
Other DBs
NCBI-GeneID:
100529021
NCBI-ProteinID:
NP_001188220
Ensembl:
ENSIPUG00000007424
UniProt:
E3TG85
LinkDB
All DBs
Position
8:complement(346416..351677)
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AA seq
198 aa
AA seq
DB search
MDDTLFQLKFTAKQLERLAKKAEKDSKAEQAKVKKALQQKNVDCARVYAENAIRKKNEGV
NWLRMASRVDAVASKVQTAVTMKGVTKSMTQVTKALDKALNSMDLQKVSAVMDKFESQVQ
NLDVHTSVMEDSMSSATTLTTPQQQVDDLIVQIAEESGLEVMDQLNELPAGASALGESSA
RTQDKEEQLSRRLAALRN
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggacgatacactgttccagttaaagttcacagcgaagcagctggagagactggcgaag
aaagccgagaaggactcgaaagcagagcaggctaaggttaaaaaggctctccagcagaag
aacgtggactgtgcacgtgtgtacgctgagaatgccatccgtaagaagaatgagggtgtg
aattggctgcgtatggcgtcacgtgtcgatgccgtggcctctaaggtccaaactgccgtc
accatgaagggggtgactaagagcatgacccaggtgaccaaggctctggataaagctctg
aactccatggacctgcagaaggtctcggccgtcatggacaagtttgagagtcaggtccag
aatctggatgtacacacttcagtgatggaggactcgatgagctcagccaccaccctgacg
acgccacagcagcaggtggatgatctgattgtgcagattgcggaggagagtgggctggag
gtgatggatcagctgaacgagcttcctgcaggagcctccgccctcggggagagttcagcc
aggacacaggacaaagaggaacagctgtcccgcagactggcggctctgaggaactga
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