Ictalurus punctatus (channel catfish): 101154657
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Entry
101154657 CDS
T04658
Name
(RefSeq) lethal(2) giant larvae protein homolog 1
KO
K06094
lethal(2) giant larvae protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101154657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
101154657
Membrane trafficking [BR:
ipu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101154657
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LLGL
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_EML_2
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
Lgl_C
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
DSE1_N
SHKBP1_KCTD3_C
Motif
Other DBs
NCBI-GeneID:
101154657
NCBI-ProteinID:
XP_017310573
Ensembl:
ENSIPUG00000016392
UniProt:
A0A2D0PVN6
LinkDB
All DBs
Position
24:complement(6020541..6053912)
Genome browser
AA seq
1044 aa
AA seq
DB search
MMKFRFRRQGNDPQREKVKQDLFAFNKTVEHGFPNQPSALAYDPKLQLMTIGTKSGAIKV
YGCPGVEFTGLHKETATVTQIHFLHGQGRILSLLDDNTLHLWEIVQKGFCSHLDEVRCFS
FPGRPGIESTCATRVTVLMPKLSCDLLAVGTEGGGVHFLELPTFTLLNKSLFQDEVMQSL
PDSYKCGKSLGPVESLQEHPQHPDKILIGYSRGLVVLWDFQSRHVDNLFLGKQQLESLVW
VRSGNSFVSSHSDGGYMVWPVSSSALCTNEPVSSTIPYGPFPCKAVNKILWRTTQSGAPL
VLFSGGMPRASYGDRHCLTILQDSAHVTLDFTSRVIDFFTIHCTDRDKEFDEPSTLVVLL
EEELVVIDLQTPGWPTIPAPYLAPLHSSAITCSYHISNVPAKLWERMVRAGQQQCSLQTR
TANWPICGGKNLAPDSKQKELLLTGHEDGTIRFWDASGVALRPLYKLSTANIFQTDCDHN
DSLTQANEEEWPPFQKVGCFDPYSDDPRLGIQKICLCKYSGKLVVAGTAGQVIVMYLCDE
KSDHMIDVVTMDLLQDREGFTWKGHDRLPEKSGSVVFAPGFQPVVLVQCMPPAAVTAVTL
HAEWNLVAFGTSHGFGLFDYHRRSPVLARCTLHPNDSLAMEGPLSRVKSLKKSLRQSFRR
IRKSRVSGKKRVLVSSPSSKVQEANAQLAEQDAEVTPVQRRIEPRSADDSLSGVVRCLCF
ADTFLRDGTHHGPTMWAGTNSGSVYAYALDVPSQEKFSERSVEALLGKEIQLMHRAPVVS
IVVLDGRGNPLPEPYEESRDLAKAPDMQGSHSVLIASEEQFKVFTLPKVSAKTKFKLTAH
EGCRVRKVALVNFCSAASEDYCENGLVCLTNLGDIHVFSVAALRPQVRYDCIRKEDISGI
ASCVFTKTGQGFYLISPSEYKRFSLSARVITEPQCRVDVDRPYEPSEHDLCMPVLPQANG
TYKTQSPGESKSAELAEGVFDEMQSALSSPGLDSPNSSADITLDTTGELTVEDVKDFLVS
VDEAENNLRNMSEEDGRLPGILIN
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatttcggttcaggcgacagggcaatgaccctcagagggagaaagtcaaacag
gacctttttgcattcaataagactgtcgagcacggattccccaatcagccgagcgctctg
gcctatgaccccaaactgcaactaatgaccattggaactaaatcaggagccatcaaagta
tatgggtgtcctggagtggagttcactggacttcataaggagactgcaaccgtcacacag
atacacttcctccatggacagggaaggattctgtccctgctggacgataacactttgcac
ctgtgggagattgtgcagaagggtttctgctcccacctggacgaggtgcgctgcttcagc
ttccccggcagacctggcatcgagagcacctgtgcgacgcgtgtgactgtccttatgccg
aaactgagctgtgatctcttggccgtgggcactgagggtggtggagtccacttcctggag
ctgcccacgttcacactgctgaacaagtcactgttccaagatgaagtcatgcagagcctt
cctgatagttacaagtgtgggaagtctctgggaccagtggagtccctacaggagcatccc
cagcatccggacaaaatcctcatcggctacagcagaggccttgttgtgctctgggacttc
caaagcagacatgtagacaacctcttccttggaaagcagcagttggagagcttggtctgg
gtccggtctgggaacagctttgtcagttcccatagtgatggtggatatatggtgtggcct
gttagtagcagtgccctctgcaccaatgaaccagtctcttccactatcccatatggcccg
tttccttgcaaagctgtgaacaagatcttgtggaggaccacccagtcgggagctccattg
gtgctgtttagtggcggcatgcctcgagccagctacggggacagacactgtttaacaata
ctgcaggacagcgcacacgttaccctggacttcacgtcgcgagtcattgactttttcacc
atccactgcacagacagagacaaggagtttgatgagccttcaacccttgttgtgctcctg
gaggaggagctggtggtgattgaccttcagacacctggctggcccaccattcctgcccca
tacctggcacctctgcactcctctgccatcacatgctcctaccacatctccaatgtgcca
gccaagctgtgggaaaggatggtgagagctgggcagcagcagtgctctctgcaaacacgc
actgcgaactggccaatatgcggaggaaagaacttggcacctgattcaaaacagaaagag
ctgctgctaactgggcacgaggatggcacaatacgcttctgggatgcctcaggagtggca
ctcagaccactctacaagctcagcacagccaacatcttccaaaccgactgtgatcacaac
gacagcctgacccaagccaacgaagaggagtggcctccattccaaaaggtgggctgcttt
gacccatacagtgatgaccccaggctaggaatccaaaagatctgcctgtgcaaatatagt
ggcaagctagtggtggccggtactgcgggacaggtgatcgtgatgtacttgtgtgacgag
aaatctgatcacatgattgacgtggtcaccatggacctcctccaggaccgggaaggtttc
acatggaagggtcatgaccggctaccagagaagtctggctctgtggtgtttgctcctgga
ttccagcctgtagtcctcgtgcagtgcatgccccctgcggcggttaccgcggtgacgctg
catgcagagtggaaccttgttgcttttggcaccagtcatggctttggtcttttcgactac
catcggcgtagccctgtgctggcaaggtgtacactacatcccaatgactcgctggctatg
gagggacctctctcacgagtgaagtccctgaagaagtcactccgtcagtcattcaggagg
attcgcaagagtagggtgtctgggaagaagcgtgttttggtcagcagtccatccagtaaa
gtccaggaggctaatgctcagctagccgagcaggatgccgaggtgacgccggtacagagg
cggatcgagccccgttcagctgatgattcgttatctggggtggtgcgctgcctctgcttc
gccgataccttccttcgagacggaacgcaccatggccctaccatgtgggctgggacaaat
tcgggcagtgtgtatgcttacgccctggacgtgccctcgcaggagaagttctcagagcgg
agtgtagaggctttgctggggaaagagatccaactcatgcacagagctccagttgtgtcc
attgtcgtgctggacggcaggggaaaccctctgcccgagccctatgaggagtcaagagac
ctggctaaagctcctgatatgcagggtagccactcggtcctgattgcctccgaagaacag
tttaaggtgttcacgctgcctaaagtcagcgcaaagaccaaattcaagctgactgcgcat
gagggctgccgtgtacggaaggtggctctggtgaacttctgcagtgctgcttctgaggac
tactgtgagaatggcctcgtgtgcctgaccaacctgggggacatccacgtgttcagtgtg
gcggcgttgaggccgcaagtgcgatatgactgcatccgcaaggaagacataagcggcatt
gcgtcctgcgtgttcaccaagactgggcaagggttttatctgatctcgccgtctgagtat
aaacggttctctctatctgcacgggttatcactgaacctcagtgtcgggtggacgtagat
cgaccttacgaaccttctgaacacgatttgtgtatgccagtactaccccaggccaacggc
acatacaagacccagtcacctggagaaagcaaatctgcagaacttgctgaaggcgtgttt
gatgaaatgcagagtgcgttatcgtctcctggcctggattctccaaacagcagtgctgat
atcacgctcgacacaacaggagagctcacggtggaagatgtgaaagatttcctagtgagt
gtggatgaggctgagaataacctgaggaatatgagcgaggaggatggaaggcttcctggg
attcttatcaactga
DBGET
integrated database retrieval system
