Ictalurus punctatus (channel catfish): 108254738
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Entry
108254738 CDS
T04658
Name
(RefSeq) transcription factor HES-5
KO
K06055
hairy and enhancer of split 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108254738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108254738
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
108254738
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
Hairy_orange
PcRGLX_1st
bHLH_NPAS4
UFL1_C
GVIN1
Motif
Other DBs
NCBI-GeneID:
108254738
NCBI-ProteinID:
XP_017305500
UniProt:
A0A2D0PKB5
LinkDB
All DBs
Position
21:complement(7768579..7770961)
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AA seq
222 aa
AA seq
DB search
MWQPYIPHCVSKLSHWLQTVRNSNKPKTHTFIWRFGSINRGDAASTNHTHSTQRDLQHRD
TAMAPTITSAMTISNEHLPLNNKLRKPMVEKMRRDRINSSIEQLKSLLAPEFLNQQPDSK
LEKADILEMTVSLLRQLQQQPALSCSSAAVNQGFSRCVNDVIHFLSKEELKTQRKLLNHI
QNLQPSSDENRRESVLPQLSSTEQQIISTEKSSVKSSLWRPW
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgtggcagccctacattcctcattgtgtgtccaagctctcccattggctccaaactgtg
agaaactccaacaagcccaagactcacacattcatatggagatttgggagtataaataga
ggagatgcagccagtacaaatcacactcactctacacagagagatctacagcacagagac
acagccatggcaccaaccatcacttctgcaatgaccatctcaaacgagcacctacctcta
aacaacaagctgaggaagccgatggtggagaagatgcgcagagatcgtatcaacagcagc
attgagcagctgaagtctctcctggctccagagttcctcaaccagcagcctgactccaaa
ctggagaaagcagatatcctggagatgacagtcagcttattgagacaactgcagcagcag
cctgcattatcctgcagctcagcagctgtcaatcaaggcttctccagatgtgtcaatgat
gttatccacttcctatccaaagaagagttgaagacacagagaaaactgctgaaccacatc
cagaacctgcagccatcttcagatgagaacaggagggaaagtgtcctgcctcagctgagc
tctacagagcagcagatcatcagcacagagaagagttcagttaagagctccctctggagg
ccctggtaa
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