Ictalurus punctatus (channel catfish): 108254742
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Entry
108254742 CDS
T04658
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor HES-5
KO
K06055
hairy and enhancer of split 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108254742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108254742
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
108254742
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
bHLH_INO2
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
108254742
NCBI-ProteinID:
XP_017305505
Ensembl:
ENSIPUG00000006289
UniProt:
A0A2D0PKC0
LinkDB
All DBs
Position
21:complement(7762841..7763706)
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AA seq
182 aa
AA seq
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MQPGQITLALQREIYRTETQMAPTITSAMTISSEHPPLNNKLRNLTVEKMRRDHINSSIE
QLKSLLAPEFLNQQSDSKLEKANILEMTVSLLRQLQQQPAFSSSSQSRCQGFSRCVHEVV
HFLSKEKVKTQSQRKLLNHIQNLQPSSYENRRESVLHPLSSTEQQIISKEKNAVKSSLWR
PW
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaggacaaatcacactcgctctacaaagagagatctacagaacagagacacag
atggcgccaaccatcacttcagcaatgaccatctcaagcgagcacccacctctgaacaac
aagctgaggaatctgacagtggagaagatgcgcagagatcatatcaacagcagcattgag
cagctgaagtctctcctggctccagagttcctcaaccagcagtctgactccaaactggag
aaagcaaatatcctggagatgacagtcagcttattgagacaactgcagcagcagcctgca
ttctcctccagctctcaatcaagatgtcaagggttctccagatgtgtccatgaggttgtc
cacttcctgtccaaagaaaaggtgaagacacagagccagagaaaactactgaaccacatc
cagaatctgcagccatcttcatacgagaacaggagggaaagtgtcctgcatccgctgagc
tctacagagcaacagatcatcagcaaagagaagaatgcagttaagagctccctctggagg
ccctggtaa
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