Ictalurus punctatus (channel catfish): 108254780
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Entry
108254780 CDS
T04658
Symbol
rab7a
Name
(RefSeq) RAB7a, member RAS oncogene family
KO
K07897
Ras-related protein Rab-7A
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04137
Mitophagy - animal
ipu04140
Autophagy - animal
ipu04144
Endocytosis
ipu04145
Phagosome
ipu04148
Efferocytosis
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108254780 (rab7a)
04145 Phagosome
108254780 (rab7a)
04140 Autophagy - animal
108254780 (rab7a)
04137 Mitophagy - animal
108254780 (rab7a)
04148 Efferocytosis
108254780 (rab7a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108254780 (rab7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108254780 (rab7a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108254780 (rab7a)
04031 GTP-binding proteins [BR:
ipu04031
]
108254780 (rab7a)
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
108254780 (rab7a)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108254780 (rab7a)
Exosomal proteins of other body fluids (saliva and urine)
108254780 (rab7a)
Exosomal proteins of colorectal cancer cells
108254780 (rab7a)
Exosomal proteins of bladder cancer cells
108254780 (rab7a)
GTP-binding proteins [BR:
ipu04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
108254780 (rab7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
ATP_bind_1
cobW
PduV-EutP
nSTAND3
Septin
AAA_16
AAA_7
NTPase_1
AAA_22
AAA_24
G-alpha
AAA_5
ATPase_2
NACHT
NB-ARC
AAA_14
SRPRB
ABC_tran
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
108254780
NCBI-ProteinID:
NP_001316174
Ensembl:
ENSIPUG00000022445
UniProt:
W8PGB8
LinkDB
All DBs
Position
21:18654859..18668083
Genome browser
AA seq
207 aa
AA seq
DB search
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
ELYNEFPEPIKLDRNERAKPSAETCSC
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgaggaagaaagttctgctgaaagtgatcatcctcggggactcaggagtggga
aagacctctctgatgaaccagtatgtgaacaagaagtttagcaatcagtacaaagctaca
ataggagcggacttcctgacaaaagaggtgatggtggacgatcggcttgtcacaatgcag
atttgggacacggcgggtcaggagcggttccagtctctgggcgtggcgttctaccgcggc
gctgactgctgcgtgctcgtctttgacgtcacggcaccgaacaccttcaagacgctggac
agctggagggacgagtttctgatccaggccagccctcgcgaccctgagaacttccccttc
gtcgtgctcggcaacaaaatcgacctggagaacaggcaggtaaccactaagcgagcacaa
gcctggtgccagagcaagaataacatcccctactttgagaccagcgccaaggaggccatc
aacgtagagcaggctttccagaccatcgcacgcaacgcactcaaacaggaaaccgaggtg
gagttgtacaacgagttcccagagccgatcaagctggacagaaacgagagagccaagcca
tcagcggagacctgcagctgctga
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