Ictalurus punctatus (channel catfish): 108254802
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Entry
108254802 CDS
T04658
Symbol
cacna2d2b
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2b
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04260
Cardiac muscle contraction
ipu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108254802 (cacna2d2b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
108254802 (cacna2d2b)
04261 Adrenergic signaling in cardiomyocytes
108254802 (cacna2d2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108254802 (cacna2d2b)
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108254802 (cacna2d2b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
Cache_3-Cache_2
VWA_CoxE
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
108254802
NCBI-ProteinID:
XP_053530081
UniProt:
A0A9F7R4Z8
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Position
21:20298757..20343943
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AA seq
1097 aa
AA seq
DB search
MAIRTRSFSVVCLLTVQIIILIFSVPWSGVESLTFPQHYTIMHWARRIEQEIDRVLQHIS
GAQQLKGLYGEKRRQYTLVRNNPRDIVEKVASDIEKLLSKKKKALEKLAAEAERVQTAHR
WQDGIKEWEIEYYDSKAEMDYDGEEVEPQMSLKLEFVYDPNFKNNVNYSYTAVQIPTDIY
KGAPVILNELNWTQALERVFMENSREDPSLLWQAFGSATGVTRYYPATPWRAPDKIDLYD
VRRRPWYIQGASSPKDMVILVDVSGSVSGLTLKLIKASVMEMLDTLSDDDYVNVARFNEK
AEAVVPCFKHLVQANVRNKKIFKEHVSQMQAKGTTDYKSGFHFAFNQLLNKTNVPRANCN
KIIMLFTDGGEDRAQDIFEQYNWPNKTVRVFTFSVGQHNYDVTPLQWIACANKGYYFEIR
SICAIRINTQEYLDVLGRPMVLAGRSAKQVQWTNVYQDALGLGLVVTGTMPVFNLTMDGN
SQNQLILGVMGVDVHLDELKRLAPRYNLGANGYIFAIDPNGYLLLHPNLQTKVVDLPEPM
TLDFLDAEVEDSNKQEIRRQMIDGRAGELTIKTLVKSMDERYIDEAVRTYAWTPINDTDY
SLGLVLPSYSEYYIQADLSDVMLQLQYLQSLLPSTFETDGHVFLAPREYCKHLHIAENNT
QFLESFLSLMVEITPETEDCDQGLIHNAILDSGIIWQLASKTWKNKDLNTYGFLALFAST
DGGLTRVYPNSAAESWDEDLEPLNSNFYRRSLDNKGYIFRAPTRTSLEDSLITENGTVGI
LVSTAVEVTVQGKTLKPAVVGVKLDLEAWVDKFKILASNVSDSRQGSHKCGPSRSCEMDC
EVNSDDLLCYLIDDGGFLVMSNQRDHWKRVGLFFGDVDPYLMYALYNNSIYARRQTFQYQ
STCEPTASSRTGAAPRHYIVPSVADLLNLAWWTSAVAWSVLQQLFYGLVYNTWFNMGDFA
FAEGTESRGSSSCVTIQSQFFFTNTTNSFNVLQDCGNCSRLFHAKRIENTNLLFVVAETL
PCSSCEIEKLTQVRMEFQEEIPCEVLSSARYRKGPEKCFDYNAMENTSACGQAHSLRCPI
GILIWVQLTLLYLTVRS
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggcgatacggactcgctccttcagcgtcgtgtgtttgttaaccgtccagatcatcatc
ctcatcttcagcgtgccgtggagcggagtggagagcctcaccttcccgcagcattacacg
ataatgcactgggctcggcggatagagcaggagatcgaccgcgtcctgcagcacatcagt
ggagcgcagcaacttaaagggctgtacggcgagaagaggaggcagtacaccctcgtcagg
aacaatcccagagacatcgtggagaaagtggcctcggacatcgagaagctgctgtccaaa
aagaagaaggctctggagaaactcgcggcagaagccgagagagtgcagacagcacatcga
tggcaggatggcatcaaggagtgggagatcgagtactacgactccaaggcagagatggat
tacgacggggaggaggtggagcctcagatgtctctgaagttggagtttgtgtacgacccg
aatttcaaaaacaacgtgaactactcgtacacggcggtgcagatccccacagacatctac
aaaggagctccggtgattctgaacgagctgaactggactcaggcgttggagagggttttt
atggagaacagtagagaagacccctcgctgctctggcaggcattcggcagcgccactgga
gtcaccaggtattatccagccacgccgtggcgagcaccggataagatcgacctgtacgac
gtgcgacggagaccctggtacatccaaggagcttcgtcccccaaagacatggtcatcctc
gtggacgtgagtggcagtgtgagtggtttaactctgaagctgattaaagcctcagtaatg
gaaatgttggacacactgtctgatgacgattacgttaatgtggcacggtttaacgagaag
gcggaggcggtggtgccgtgttttaaacacttggtccaggcgaatgtgaggaacaaaaaa
atctttaaagaacacgtgtcacagatgcaggccaaaggcacgacggactacaaatcagga
ttccacttcgccttcaaccagctgctcaataagacgaacgtccccagagcgaactgtaat
aagataatcatgttgtttacggatggcggtgaggatcgcgctcaggacatcttcgagcag
tacaactggcccaacaagacggtgcgagtgtttacgttctcagtggggcagcacaactac
gacgtcacgccgctgcagtggatcgcctgcgctaacaaaggttactattttgagatccgc
tccatctgcgccatcaggattaacacccaggagtatttggatgtgcttggtcgccccatg
gtcttggctgggcgaagtgccaagcaggttcagtggaccaacgtttatcaggacgccctg
ggtttgggattggtggtgaccgggacgatgcctgtctttaatctcaccatggacggaaac
tctcagaatcagctgatcctgggagtgatgggcgtggacgttcacctggacgaactgaag
aggctcgcgccgcgctataaccttggagccaatggctacatttttgccatcgacccaaac
ggatatctgctccttcacccaaacctgcagaccaaggtggtggacctgcctgaacccatg
actctggacttcttggatgccgaagtggaagacagcaataaacaggagatccgaaggcag
atgatagacggccgagcaggagagctgaccatcaagactctcgtcaagtcgatggacgag
cgctatatcgatgaggcagtacggacgtacgcgtggacccccatcaacgacactgactac
agtctgggcttggtattgccttcatacagcgagtattacatccaggctgacctgagtgac
gtcatgctccaactgcagtatctgcagtctctgctgcccagcactttcgagacagacgga
catgttttcctggccccgagagaatactgcaagcacctgcacatcgccgagaacaacacc
cagtttctggagagcttcctgtcactgatggtggagatcacaccagagacagaggactgt
gaccaaggcctgattcacaacgccattttggattcggggatcatctggcagctggcctcc
aagacttggaagaacaaggacctgaacacgtatggcttcctggcgttgtttgcgtccact
gatggaggtctcaccagagtgtatccaaactcagcagcggaatcttgggatgaagactta
gagcctctgaattccaacttctaccgccgcagtctggacaataagggctacatcttcaga
gccccaactcgcacatccttggaggactctttgatcacagagaacggcacggtggggatc
ctcgtctcaactgctgtggaggttacggtgcaaggcaaaaccctgaaaccagcagtggtt
ggggttaagctggatttggaggcgtgggtcgacaagttcaagattctggccagcaacgtt
tctgacagcaggcaaggctctcacaagtgtggtccttccagatcctgtgagatggactgt
gaggtcaacagtgacgatctgctctgctacctgattgatgatggaggctttctggtgatg
tctaatcagagagaccactggaaaagggttggtttgtttttcggagatgtagatccctac
ctaatgtacgcgctctataataactccatctacgcccgaaggcagacgttccagtaccag
tcgacatgtgagcccacagccagcagccgcacgggagcagcaccacgccactacatcgtg
ccctccgtcgctgacttgctcaatttggcctggtggacatctgcggtcgcttggtctgta
ctgcagcagctcttctacggccttgtgtacaacacctggtttaacatgggtgattttgct
tttgctgaaggtacagagagcagaggaagcagcagctgtgtgactattcagagccagttc
ttcttcaccaacaccaccaactcattcaacgtgctgcaggactgtggaaactgttccaga
ttattccatgccaaaaggatagaaaacaccaacctgctgttcgtggtggccgaaacgctt
ccctgcagctcctgcgagattgaaaagcttacacaagtcaggatggagtttcaggaggaa
attccctgtgaagtgttgagctctgcccgatatcggaaaggacctgagaagtgctttgat
tacaatgctatggagaacacgtcggcgtgtgggcaggctcactctttgcgctgtccaatc
gggatcctcatctgggtccagttaacattgctttacctcactgttcgatcttaa
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